☰ Navigation Tabs
Solution structure of the poliovirus 3'-UTR Y-stem
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 2mM RNA, pH 6.8 90% H2O/10% D2O 5 mM 6.8 ambient 300 2 2D NOESY 2mM RNA pH 6.8 100% D2O 5 mM 6.8 ambient 300 3 DQF-COSY 2mM RNA pH 6.8 100% D2O 5 mM 6.8 ambient 300 4 2D TOCSY 2mM RNA pH 6.8 100% D2O 5 mM 6.8 ambient 300 5 2D-HSQC 2mM RNA pH 6.8 100% D2O 5 mM 6.8 ambient 300 6 2D-HSQC 2mM RNA, 27 mg/ml philamentous phage Pf1 100% D2O 5 mM 6.8 ambient 300
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Varian INOVA 600
NMR Refinement Method Details Software torsion angle dynamics VNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 13 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 6.1 Varian 2 processing NMRPipe 2.1 F. Delaglio 3 data analysis Sparky 3.106 T.D. Goddard and D.G. Kneller 4 structure solution X-PLOR 3.1 A.T. Brunger 5 refinement X-PLOR 3.1 A.T. Brunger