NMR Structure of CFr (C-terminal fragment of computationally designed novel-topology protein Top7)
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 1mM CFr, 25mM phosphate buffer, pH 7.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | 25mM | 7.0 | AMBIENT | 298 | |
| 2 | 2D NOESY | 1mM CFr, 25mM phosphate buffer, pH 7.0 | 100% D2O | 25mM | 7.0 | AMBIENT | 298 | |
| 3 | 3D_13C-separated_NOESY | 1.0mM CFr U-15N, 13C, 25mM phosphate buffer, pH 7.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | 25mM | 7.0 | AMBIENT | 298 | |
| 4 | 3D_15N-separated_NOESY | 1.0mM CFr U-15N, 25mM phosphate buffer, pH 7.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | 25mM | 7.0 | AMBIENT | 298 | |
| 5 | 3D_13C-filtered_NOESY | 1.4mM CFr U-15N, 13C, 1.4mM 14N, 12C CFr, 25mM phosphate buffer, pH 7.0 | 100% D2O | 25mM | 7.0 | AMBIENT | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DMX | 750 |
| 2 | Bruker | DRX | 500 |
| 3 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (fewest violations) |
| Additional NMR Experimental Information | |
|---|---|
| Details | Hydrogen bond restraints were derived from D2O protection analysis. Torsion angle restraints were derived from TALOS predictions |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | CYANA | 2.0 | P.Guntert et al. |
| 2 | structure solution | CYANA | 2.0 | P.Guntert et al. |
| 3 | data analysis | TALOS | G. Cornilescu et al. | |
| 4 | processing | NMRPipe | 2.3 | F. Delaglio et al. |
| 5 | data analysis | Sparky | 3.112 | T. Goddard and D. Kneller |














