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NMR structure of the computationally designed procarboxypeptidase-A (1AYE) domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1mM AYE, 50mM phosphate buffer, pH 7.0, 100mM KCl, 90% H2O, 10% D2O 90% H2O/10% D2O 150mM 7.0 AMBIENT 298 2 2D NOESY 1mM AYE, 50mM phosphate buffer, pH 7.0, 100mM KCl 100% D2O 150mM 7.0 AMBIENT 298 3 3D_13C-separated_NOESY 1mM AYE U-15N, 13C, 50mM phosphate buffer, pH 7.0, 100mM KCl, 90% H2O, 10% D2O 90% H2O/10% D2O 150mM 7.0 AMBIENT 298 4 3D_15N-separated_NOESY 1mM AYE U-15N, 50mM phosphate buffer, pH 7.0, 100mM KCl, 90% H2O, 10% D2O 90% H2O/10% D2O 150mM 7.0 AMBIENT 298 5 3D_13C-filtered_NOESY 1.4mM AYE U-15N, 13C, 1.4mM 14N,12C AYE, 50mM phosphate buffer, pH 7.0, 100mM KCl,100% D2O 100% D2O 150mM 7.0 AMBIENT 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 750 2 Bruker DRX 500 3 Varian INOVA 600
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Additional NMR Experimental Information Details Hydrogen bond restraints were derived from D2O protection analysis. Torsion angle restraints were derived from TALOS predictions
Computation: NMR Software # Classification Version Software Name Author 1 refinement CYANA 2.1 P.Guntert et al. 2 structure solution CYANA 2.1 P.Guntert et al. 3 data analysis TALOS G. Cornilescu et al. 4 processing NMRPipe 2.3 F. Delaglio et al. 5 data analysis Sparky 3.112 T. Goddard and D. Kneller