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Histone fold heterodimer of the Chromatin Accessibility Complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2BYM PDB ENTRY 2BYM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 3.5 2M AMMONIUM SULFATE, 0.1M CITRIC ACID, PH 3.5
Crystal Properties Matthews coefficient Solvent content 2.31 46.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.01 α = 90 b = 76.01 β = 90 c = 166.08 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 24 99.9 0.07 4.4 5.8 22490 2 51.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.5 99.9 0.26 3 5.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2BYM 2.4 23.83 22445 2231 99.9 0.237 0.237 0.2368 0.278 0.2787 RANDOM 66
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 11.61 10.29 11.61 -23.22
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 19.9 c_scangle_it 3.63 c_mcangle_it 2.42 c_scbond_it 2.21 c_mcbond_it 1.35 c_angle_deg 1.3 c_improper_angle_d 0.81 c_bond_d 0.008 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 19.9 c_scangle_it 3.63 c_mcangle_it 2.42 c_scbond_it 2.21 c_mcbond_it 1.35 c_angle_deg 1.3 c_improper_angle_d 0.81 c_bond_d 0.008 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2465 Nucleic Acid Atoms Solvent Atoms 38 Heterogen Atoms 15
Software Software Software Name Purpose CNS refinement MOSFLM data reduction SCALA data scaling AMoRE phasing