1OOG

Complex of Drosophila odorant binding protein LUSH with propanol


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP4.6277PEG 4000, sodium acetate, n-propanol, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.1643.11

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 46.98α = 90
b = 46.98β = 90
c = 111.457γ = 90
Symmetry
Space GroupP 43

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray105CCDSBC-1Mirrors2002-02-21MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.97857APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.453098.70.04127.14.14274342187-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.451.598.90.223.23.44216

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1OOF1.45303834637127419496.830.176450.176450.174130.19743RANDOM14.482
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.050.05-0.1
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg14.981
r_scangle_it4.668
r_dihedral_angle_1_deg3.752
r_scbond_it2.799
r_mcangle_it1.753
r_angle_refined_deg1.679
r_mcbond_it0.989
r_angle_other_deg0.831
r_nbd_refined0.237
r_symmetry_vdw_other0.222
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg14.981
r_scangle_it4.668
r_dihedral_angle_1_deg3.752
r_scbond_it2.799
r_mcangle_it1.753
r_angle_refined_deg1.679
r_mcbond_it0.989
r_angle_other_deg0.831
r_nbd_refined0.237
r_symmetry_vdw_other0.222
r_nbd_other0.194
r_symmetry_hbond_refined0.192
r_xyhbond_nbd_refined0.14
r_symmetry_vdw_refined0.114
r_chiral_restr0.101
r_bond_refined_d0.023
r_gen_planes_refined0.008
r_gen_planes_other0.003
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2025
Nucleic Acid Atoms
Solvent Atoms246
Heterogen Atoms24

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
CNSphasing