☰ Navigation Tabs
(ADP.AlF4)2(ADP.SO4) bovine F1-ATPase (all three catalytic sites occupied)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1BMF PDB CODE 1BMF, NATIVE BOVINE MITOCHONDRIAL F1- ATPASE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 CRYSTALS WERE GROWN IN THE PRESENCE OF AZIDE, A KNOWN INHIBITOR, BUT THIS HAS NOT BEEN LOCATED IN THE STRUCTURE., pH 8.00
Crystal Properties Matthews coefficient Solvent content 2.64 54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 267.7 α = 90 b = 106.2 β = 90 c = 138.3 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 1998-08-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.6 SRS PX9.6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 13.5 79.6 0.066 9.1 2.1 209953 26.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.14 40.6 0.48 1.7 1.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB CODE 1BMF, NATIVE BOVINE MITOCHONDRIAL F1- ATPASE 2 13.5 200363 9590 79.6 0.201 0.1914 0.264 RANDOM 45
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 28.9 p_staggered_tor 16.2 p_scangle_it 5.94 p_scbond_it 4.71 p_planar_tor 3.8 p_mcangle_it 2.75 p_mcbond_it 1.96 p_multtor_nbd 0.209 p_xyhbond_nbd 0.192 p_singtor_nbd 0.187
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 28.9 p_staggered_tor 16.2 p_scangle_it 5.94 p_scbond_it 4.71 p_planar_tor 3.8 p_mcangle_it 2.75 p_mcbond_it 1.96 p_multtor_nbd 0.209 p_xyhbond_nbd 0.192 p_singtor_nbd 0.187 p_chiral_restr 0.124 p_hb_or_metal_coord 0.045 p_planar_d 0.037 p_angle_d 0.025 p_plane_restr 0.023 p_bond_d 0.012 p_angle_deg p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 24429 Nucleic Acid Atoms Solvent Atoms 1693 Heterogen Atoms 207
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling AMoRE phasing