1ZHC
Solution structure of HP1242 from Helicobacter pylori
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | U-15N, 13C; 50mM phosphate buffer, 100mM NaCl, 1mM EDTA, pH 6.8; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mm NaCl | 6.8 | ambient | 303 | |
2 | 3D_15N-separated_NOESY | U-15N, 13C; 50mM phosphate buffer, 100mM NaCl, 1mM EDTA, pH 6.8; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mm NaCl | 6.8 | ambient | 303 | |
3 | HNHA | U-15N, 13C; 50mM phosphate buffer, 100mM NaCl, 1mM EDTA, pH 6.8; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mm NaCl | 6.8 | ambient | 303 | |
4 | 2D NOESY | U-15N, 13C; 50mM phosphate buffer, 100mM NaCl, 1mM EDTA, pH 6.8; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mm NaCl | 6.8 | ambient | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, torsion angle dynamics | the structures are based on a total of 1040 restraints, 911 are NOE-derived distance constraints, 129 dihedral angle restraints | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with acceptable covalent geometry |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 2 | Delaglio |
2 | data analysis | NMRView | 5 | Johnson |
3 | structure solution | CNS | 1.1 | Brunger |
4 | refinement | CNS | 1.1 |