1ZHC

Solution structure of HP1242 from Helicobacter pylori


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESYU-15N, 13C; 50mM phosphate buffer, 100mM NaCl, 1mM EDTA, pH 6.8; 90% H2O, 10% D2O90% H2O/10% D2O100mm NaCl6.8ambient303
23D_15N-separated_NOESYU-15N, 13C; 50mM phosphate buffer, 100mM NaCl, 1mM EDTA, pH 6.8; 90% H2O, 10% D2O90% H2O/10% D2O100mm NaCl6.8ambient303
3HNHAU-15N, 13C; 50mM phosphate buffer, 100mM NaCl, 1mM EDTA, pH 6.8; 90% H2O, 10% D2O90% H2O/10% D2O100mm NaCl6.8ambient303
42D NOESYU-15N, 13C; 50mM phosphate buffer, 100mM NaCl, 1mM EDTA, pH 6.8; 90% H2O, 10% D2O90% H2O/10% D2O100mm NaCl6.8ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX600
NMR Refinement
MethodDetailsSoftware
simulated annealing, torsion angle dynamicsthe structures are based on a total of 1040 restraints, 911 are NOE-derived distance constraints, 129 dihedral angle restraintsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2Delaglio
2data analysisNMRView5Johnson
3structure solutionCNS1.1Brunger
4refinementCNS1.1