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Solution structure of the human Mms2-Ubiquitin complex
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 F1-filtered, F3-edited NOESY [U-13C; U-15N]-Ubiquitin + hMms2 (4:1 ratio) 90% H20 : 10% D20 90% H20 : 10% D20 150 mM NaCl 7.5 1 atm 293 2 F1-filtered, F3-edited NOESY [U-13C; U-15N]-hMms2 + Ubiquitin (1:4 ratio) 90% H20 : 10% D20 90% H20 : 10% D20 150 mM NaCl 7.5 1 atm 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800 3 Varian INOVA 500
NMR Refinement Method Details Software protein-protein docking HADDOCK algorithm VNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 10 Representative Model 10 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 6.1c Varian, Inc. 2 processing NMRPipe 2.3 Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J., Bax, A. 3 data analysis Sparky 3.110 Goddard, T.D., Kneller, D.G. 4 structure solution HADDOCK 1.3 Dominguez, C., Boelens, R., Bonvin, A.M.J.J. 5 refinement HADDOCK 1.3 Dominguez, C., Boelens, R., Bonvin, A.M.J.J.