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Solution structure of At3g04780.1, an Arabidopsis ortholog of the C-terminal domain of human thioredoxin-like protein
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O 90% H2O/10% D2O 7.2 1 atm 298.2 2 3D_13C-separated_NOESY 1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O 90% H2O/10% D2O 7.2 1 atm 298.2 3 3D HNCACB 1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O 90% H2O/10% D2O 7.2 1 atm 298.2 4 3D CBCA(CO)NH 1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O 90% H2O/10% D2O 7.2 1 atm 298.2 5 3D HCCH-TOCSY 1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O 90% H2O/10% D2O 7.2 1 atm 298.2 6 3D C(CO)NH 1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O 90% H2O/10% D2O 7.2 1 atm 298.2
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Bruker DMX 500
NMR Refinement Method Details Software simulated annealing
molecular dynamics VNMR
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 6.1 Varian 2 collection XwinNMR 2.6 Bruker 3 processing NMRPipe 97.027.12.56 Delaglio 4 data analysis Sparky 3.72 Goddard T.D., Kneller, D.G. 5 structure solution CYANA 1.06 Guntert 6 refinement Xplor-NIH 2.9.3 Schwieters, et al.