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 1XOY | pdb_00001xoy

Solution structure of At3g04780.1, an Arabidopsis ortholog of the C-terminal domain of human thioredoxin-like protein

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1xoya1 All beta proteins Galactose-binding domain-like Galactose-binding domain-like Hypothetical protein AT3g04780/F7O18_27 Hypothetical protein AT3g04780/F7O18_27 thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], SCOPe (2.08)
Ad1xoya2 Artifacts Tags Tags Tags N-terminal Tags thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 Familyhypothetical protein at3g04780/f7o18 27 8031719 4003088 SCOP2 (2022-06-29)
ASCOP2 Superfamilygalactose-binding domain-like 8044097 3000087 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APITHe1xoyA1 A: beta sandwichesX: jelly-rollH: Galactose-binding domain-likeT: Galactose-binding domain-likeF: PITHECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.470 Mainly Beta Sandwich Jelly Rolls PITH domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF06201PITH domain (PITH)PITH domainThis family was formerly known as DUF1000. The full-length, Txnl1, protein which is a probable component of the 26S proteasome, uses its C-terminal, PITH, domain to associate specifically with the 26S proteasome. PITH derives from proteasome-interact ...This family was formerly known as DUF1000. The full-length, Txnl1, protein which is a probable component of the 26S proteasome, uses its C-terminal, PITH, domain to associate specifically with the 26S proteasome. PITH derives from proteasome-interacting thioredoxin domain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
hypothetical protein At3g04780.1- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
IPR045099PITH domain-containing protein 1-likeFamily
IPR037047PITH domain superfamilyHomologous Superfamily
IPR010400PITH domainDomain