X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.21.4M SODIUM CITRATE, 0.1M HEPES BUFFER, PH 7.2 PROTEIN SOLUTION CONCENTRATION 6.5 MG/ML INHIBITOR SOAKING SOLUTION 0.375MM 2-HYDRAZINOPYRIDINE MADE UP IN 1.4M SODIUM CITRATE, 0.1M HEPES BUFFER, PH 7.2. CRYSTAL SOAKED FOR 30 DAYS. CRYOPROTECTANT 20% GLYCEROL, 1.44M SODIUM CITRATE BUFFER, PH 6.4
Crystal Properties
Matthews coefficientSolvent content
2.7354.9

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 134.46α = 90
b = 166.07β = 90
c = 79.41γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCHMIRRORS1996-03-15M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSRS BEAMLINE PX9.6SRSPX9.6

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
122083.70.0578.72.610055024.21
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
22.0572.90.223.32

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONLEAST SQUARES REFINEMENTPDB ENTRY 1OAC22010055083.70.20627.62
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor24.102
p_staggered_tor17.671
p_scangle_it10.129
p_scbond_it7.582
p_mcangle_it6.625
p_mcbond_it5.137
p_planar_tor2.37
p_multtor_nbd0.213
p_xyhbond_nbd0.194
p_singtor_nbd0.185
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor24.102
p_staggered_tor17.671
p_scangle_it10.129
p_scbond_it7.582
p_mcangle_it6.625
p_mcbond_it5.137
p_planar_tor2.37
p_multtor_nbd0.213
p_xyhbond_nbd0.194
p_singtor_nbd0.185
p_chiral_restr0.11
p_planar_d0.048
p_angle_d0.035
p_hb_or_metal_coord0.03
p_bond_d0.01
p_plane_restr0.01
p_angle_deg
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms11319
Nucleic Acid Atoms
Solvent Atoms1064
Heterogen Atoms48

Software

Software
Software NamePurpose
CCP4model building
PROLSQrefinement
MOSFLMdata reduction
CCP4data scaling
CCP4phasing