X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP4.62981.4M Ammonium sulfate, 0.1M sodium acetate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.9157.4

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 143.634α = 90
b = 59.154β = 128.67
c = 93.998γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42003-01-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.3.10.97979ALS8.3.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1272.5597.841841409212
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.196.20.3352.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSAD & Molecular replacementTHROUGHOUT1KPP & 1UBO272.554184140921202597.80.19060.203190.201230.23998RANDOM27.29
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.8-1.48-1.211.16
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.579
r_scangle_it3.48
r_scbond_it2.201
r_mcangle_it1.422
r_angle_refined_deg1.357
r_angle_other_deg0.8
r_mcbond_it0.739
r_nbd_other0.235
r_symmetry_hbond_refined0.22
r_xyhbond_nbd_refined0.215
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.579
r_scangle_it3.48
r_scbond_it2.201
r_mcangle_it1.422
r_angle_refined_deg1.357
r_angle_other_deg0.8
r_mcbond_it0.739
r_nbd_other0.235
r_symmetry_hbond_refined0.22
r_xyhbond_nbd_refined0.215
r_symmetry_vdw_other0.211
r_symmetry_vdw_refined0.193
r_nbd_refined0.19
r_chiral_restr0.085
r_nbtor_other0.084
r_metal_ion_refined0.037
r_bond_refined_d0.019
r_gen_planes_refined0.006
r_gen_planes_other0.006
r_bond_other_d0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3439
Nucleic Acid Atoms
Solvent Atoms350
Heterogen Atoms32

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement