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THE CRYSTAL STRUCTURE OF UCN-01 IN COMPLEX WITH PHOSPHO-CDK2/CYCLIN A
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1QMZ PDB ENTRY 1QMZ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.4 277 1.25M (NH4)2SO4, 0.8M KCl, 100mM HEPES, pH 7.4, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.88 57.36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.62 α = 90 b = 134.57 β = 90 c = 147.97 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 0.934 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 100 87.8 0.09 4.3 65518 57525
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.38 80.8 0.331 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1QMZ 2.3 100 57525 54590 2904 87.03 0.21818 0.21818 0.2155 0.26831 0.2735 RANDOM 42.484
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.76 0.81 -0.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.824 r_scangle_it 3.079 r_scbond_it 1.765 r_mcangle_it 1.598 r_angle_refined_deg 1.54 r_mcbond_it 0.844 r_symmetry_vdw_refined 0.311 r_nbd_refined 0.218 r_symmetry_hbond_refined 0.215 r_xyhbond_nbd_refined 0.162
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.824 r_scangle_it 3.079 r_scbond_it 1.765 r_mcangle_it 1.598 r_angle_refined_deg 1.54 r_mcbond_it 0.844 r_symmetry_vdw_refined 0.311 r_nbd_refined 0.218 r_symmetry_hbond_refined 0.215 r_xyhbond_nbd_refined 0.162 r_chiral_restr 0.095 r_bond_refined_d 0.009 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8942 Nucleic Acid Atoms Solvent Atoms 402 Heterogen Atoms 72
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling MOLREP phasing