1OG7

Three-dimensional structure in lipid micelles of the pediocin-like antimicrobial peptide sakacin P.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1NOESY90% TFE,0.1% TFA, 10% D2O,1MM PEPTIDE2.8298
2TOCSY90% TFE,0.1% TFA, 10% D2O,1MM PEPTIDE2.8298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
2BrukerDRX600
NMR Refinement
MethodDetailsSoftware
MOLECULAR DYNAMICS/ SIMULATED ANNEALINGAMBER 6, SAN FRANCISCO, UNIVERSITY OF CALIFORNIA, 1999.AMBER
NMR Ensemble Information
Conformer Selection CriteriaLEAST RESTRAIN VIOLATION AND OVERALL ENERGY
Conformers Calculated Total Number50
Conformers Submitted Total Number10
Representative Model1 (n/a)
Additional NMR Experimental Information
DetailsTHE STRUCTURES WERE DETERMINED USING A COMBINATION OF 1H NMR SPECTROSCOPIC METHODS FOLLOWED BY DISTANCE GEOMETRY/SIMULATED ANNEALING CALCULATIONS.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAMBER6CASE, D.A., PEARLMAN, D.A., CALDWELL, III, J.C., ET AL.
2structure solutionARIA
3structure solutionAMBER