☰ Navigation Tabs
E.coli MutS R697A: an ATPase-asymmetry mutant
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1E3M PDB ENTRY 1E3M
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 297 PEG 6000, NaCl, MgCl2, HEPES, ADP, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 297K
Crystal Properties Matthews coefficient Solvent content 2.89 57.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.902 α = 90 b = 92.404 β = 90 c = 261.593 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2002-03-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 0.9330 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 30 98.7 0.124 0.124 4.6 3.5 66737 66708 1 1.1 57.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.74 98.7 0.657 0.657 1.1 3.5 9717
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1E3M 2.6 20 67769 65273 1283 98.21 0.21565 0.21565 0.21497 0.2124 0.24892 0.2485 RANDOM 10.362
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -4.67 9.14 -4.47
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.82 r_scangle_it 1.381 r_angle_refined_deg 1.133 r_scbond_it 0.995 r_angle_other_deg 0.792 r_mcangle_it 0.523 r_mcbond_it 0.273 r_symmetry_vdw_other 0.236 r_nbd_other 0.21 r_xyhbond_nbd_refined 0.193
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.82 r_scangle_it 1.381 r_angle_refined_deg 1.133 r_scbond_it 0.995 r_angle_other_deg 0.792 r_mcangle_it 0.523 r_mcbond_it 0.273 r_symmetry_vdw_other 0.236 r_nbd_other 0.21 r_xyhbond_nbd_refined 0.193 r_nbd_refined 0.182 r_symmetry_hbond_refined 0.146 r_symmetry_vdw_refined 0.126 r_nbtor_other 0.082 r_chiral_restr 0.06 r_bond_refined_d 0.009 r_gen_planes_other 0.008 r_gen_planes_refined 0.004 r_bond_other_d 0.003 r_dihedral_angle_2_deg r_xyhbond_nbd_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12286 Nucleic Acid Atoms 714 Solvent Atoms 364 Heterogen Atoms 56
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling MOLREP phasing REFMAC refinement CCP4 data scaling