1LB7
IGF-F1-1, A PEPTIDE ANTAGONIST OF IGF-1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | DQF-COSY | 5.0 mM igf-f1-1 90%, 10% D2O, pH 5.1 | H2O | 0 | 5.1 | atm | 303 | |
2 | 2D-ROESY | 5.0 mM igf-f1-1 90%, 10% D2O, pH 5.1 | H2O | 0 | 5.1 | atm | 303 | |
3 | COSY-35 | 5.0 mM igf-f1-f, 100% D2O, pH* 5.1 | D2O | 0 | 5.1 | atm | 303 | |
4 | 2D-ROESY | 5.0 mM igf-f1-f, 100% D2O, pH* 5.1 | D2O | 0 | 5.1 | atm | 303 | |
5 | 1H-13C-HSQC | 5.0 mM igf-f1-f, 100% D2O, pH* 5.1 | D2O | 0 | 5.1 | atm | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, molecular dynamics | The structures are based on 91 distance restraints and 26 dihedral angle restraints. None of the final structures have violations > 0.07A or 1.0 degrees. The mean rmsd to the mean coordinates for heavy atoms of residues Cys3 to Tyr15 is 0.31+/-0.06 A. | DGII |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 80 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average,fewest violations,lowest energy,minimized average structure) |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard 2D homonuclear techniques to generate distance (ROESY) and dihederal angle (DQF-COSY, COSY-35)restraints. Additional dihedral angle restraints were derived from chemical shift information using the program TALOS |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | DGII | v98.0 | Havel |
2 | refinement | Discover | v98.0 | Accelrys |
3 | refinement | TALOS | Feb 2000 | Delaglio & Bax |