☰ Navigation Tabs
BOVINE MITOCHONDRIAL F1-ATPASE AT 100K
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1BMF PDB CODE 1BMF, BOVINE MITOCHONDRIAL F1-ATPASE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 pH 8.00
Crystal Properties Matthews coefficient Solvent content 3 54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 280.8 α = 90 b = 107.4 β = 90 c = 139.6 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1996-02-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID2 ESRF ID2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.61 20 94.8 0.061 18.1 3.03 121408 53.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.61 2.75 99.1 0.202 7.1 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB CODE 1BMF, BOVINE MITOCHONDRIAL F1-ATPASE 2.61 20 115942 95 0.232 0.28 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 32.2 p_staggered_tor 17.6 p_scangle_it 7.5 p_scbond_it 5.8 p_planar_tor 3.5 p_mcangle_it 3.3 p_mcbond_it 2.1 p_multtor_nbd 0.22 p_singtor_nbd 0.19 p_xyhbond_nbd 0.19
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 32.2 p_staggered_tor 17.6 p_scangle_it 7.5 p_scbond_it 5.8 p_planar_tor 3.5 p_mcangle_it 3.3 p_mcbond_it 2.1 p_multtor_nbd 0.22 p_singtor_nbd 0.19 p_xyhbond_nbd 0.19 p_hb_or_metal_coord 0.142 p_chiral_restr 0.12 p_planar_d 0.037 p_angle_d 0.027 p_plane_restr 0.02 p_bond_d 0.011 p_angle_deg p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 22663 Nucleic Acid Atoms Solvent Atoms 542 Heterogen Atoms 161
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling AMoRE phasing