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P14-FLUORESCEIN-N135Q-S380C-ANTITHROMBIN-III
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2ANT
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 5MG/ML 1:1 MIX OF INHIBITORY: LATENT ANTITHROMBIN-III, 10.5% PEG 4000, 65 MM NACACODYLATE, PH 6.5
Crystal Properties Matthews coefficient Solvent content 3.17 62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 69.175 α = 90 b = 99.865 β = 105.63 c = 89.421 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX7.2 SRS PX7.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.85 20 99.7 0.073 15.5 3.8 27305
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2ANT 2.85 20 27305 1351 99.7 0.207 0.2057 0.258 SAME AS 2ANT 66
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 27 p_staggered_tor 22.1 p_scangle_it 11.58 p_scbond_it 8.64 p_mcangle_it 8.514 p_mcbond_it 5.545 p_planar_tor 3.8 p_multtor_nbd 0.224 p_chiral_restr 0.19 p_singtor_nbd 0.162
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 27 p_staggered_tor 22.1 p_scangle_it 11.58 p_scbond_it 8.64 p_mcangle_it 8.514 p_mcbond_it 5.545 p_planar_tor 3.8 p_multtor_nbd 0.224 p_chiral_restr 0.19 p_singtor_nbd 0.162 p_xyhbond_nbd 0.161 p_planar_d 0.029 p_plane_restr 0.0281 p_angle_d 0.027 p_bond_d 0.011 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6412 Nucleic Acid Atoms Solvent Atoms 37 Heterogen Atoms 160
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling AMoRE phasing