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PROCAPSID OF BACTERIOPHAGE PHIX174
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1PHX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6 PROCAPSIDS WERE CRYSTALLIZED BY
VAPOUR DIFFUSION FROM 43-37% (OF SATURATION) AMMONIUM
SULFATE, 100MM MES PH6.0, VAPOR DIFFUSION
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 774 α = 90 b = 774 β = 90 c = 774 γ = 90
Symmetry Space Group I 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 277 IMAGE PLATE FUJI MIRRORS 1997-02-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F1 CHESS F1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.5 45 67.14 0.217 0.217 2.69 632194 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 3.5 3.63 27.3 2.11
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1PHX 3.5 8 2 564313 67.2 0.275 0.4833 24.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 28.31 x_scangle_it 2.5 x_mcangle_it 2 x_scbond_it 2 x_angle_deg 1.95 x_mcbond_it 1.5 x_improper_angle_d 1.09 x_bond_d 0.016 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 28.31 x_scangle_it 2.5 x_mcangle_it 2 x_scbond_it 2 x_angle_deg 1.95 x_mcbond_it 1.5 x_improper_angle_d 1.09 x_bond_d 0.016 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9755 Nucleic Acid Atoms Solvent Atoms 96 Heterogen Atoms
Software Software Software Name Purpose MGR model building X-PLOR refinement DENZO data reduction SnB phasing MGR phasing