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KINASE DOMAIN OF HUMAN C-TERMINAL SRC KINASE (CSK) IN COMPLEX WITH INHIBITOR STAUROSPORINE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1FMK PDB ENTRY 1FMK
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 9 VAPOUR DIFFUSION, PROTEIN SOLUTION (10 MG/ML) CONTAINING 1MM STAUROSPORINE WAS
MIXED IN 1:1 RATIO WITH THE RESERVOIR SOLUTION. THE RESERVOIR SOLUTION
CONTAINED 0.2M MGCL2, 0.1M TRISHCL PH 9.0, 24% PEG 4000.
Crystal Properties Matthews coefficient Solvent content 2 38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.49 α = 90 b = 120.58 β = 90 c = 48.29 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 IMAGE PLATE RIGAKU MIRROR 1997-12-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 30 93.6 0.075 13.7 3 30746 36
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.4 2.49 61.8 0.224 3.3 1.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1FMK 2.4 20 10089 1007 93.6 0.199 0.287 RANDOM 43.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 20.7 p_staggered_tor 18.6 p_scangle_it 5.97 p_planar_tor 4.6 p_scbond_it 4.58 p_mcangle_it 2.29 p_mcbond_it 1.34 p_multtor_nbd 0.264 p_chiral_restr 0.261 p_singtor_nbd 0.187
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 20.7 p_staggered_tor 18.6 p_scangle_it 5.97 p_planar_tor 4.6 p_scbond_it 4.58 p_mcangle_it 2.29 p_mcbond_it 1.34 p_multtor_nbd 0.264 p_chiral_restr 0.261 p_singtor_nbd 0.187 p_angle_d 0.038 p_planar_d 0.038 p_bond_d 0.013 p_plane_restr 0.012 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1953 Nucleic Acid Atoms Solvent Atoms 152 Heterogen Atoms 35
Software Software Software Name Purpose CCP4 model building REFMAC refinement DENZO data reduction SCALEPACK data scaling CCP4 phasing