1AWW

SH3 DOMAIN FROM BRUTON'S TYROSINE KINASE, NMR, 42 STRUCTURES


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1NOESY 6.5303
2TOCSY 6.5303
3DQF-COSY 6.5303
415N-TOCSY-HSQC 6.5303
515N-NOESY-HSQC 6.5303
6HNHA 6.5303
7HNHB 6.5303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY 500500
NMR Refinement
MethodDetailsSoftware
AB INITIO-SIMULATED ANNEALINGTHE STRUCTURE WAS DETERMINED USING 756 DISTANCE RESTRAINTS, 52 DIHEDRAL ANGLE RESTRAINTS AND 22 HYDROGEN BOND RESTRAINTS. THE HYDROGEN BOND RESTRAINTS WERE USED ONLY IN THE LAST STEP OF REFINEMENT. 50 STRUCTURES WERE CALCULATED AND REFINED USING AB INITIO SIMULATED ANNEALING PROTOCOL FOR X-PLOR (1). ALL FORCE CONSTANTS AND POTENTIALS WERE SET TO THE DEFAULT (PROTOCOL) VALUES EXCEPT FOR THE VAN DER WAALS' RADII SCALE FACTOR ("REPEL"), WHICH WAS DECREASED TO 0.80 INSTEAD OF 0.75 DURING THE FINAL COOLING STAGES IN THE REFINEMENT. THIS RESULTS IN MORE REASONABLE BACKBONE CONFORMATION AND SOMEWHAT HIGHER X-PLOR TOTAL ENERGIES. CENTER AVERAGING PSEUDOATOM CORRECTION WAS USED FOR ALL DISTANCE RESTRAINT S(2). ON THE BASIS OF X-PLOR TOTAL ENERGY 42 LOWEST ENERGY STRUCTURES WERE SELECTED.X-PLOR
NMR Ensemble Information
Conformer Selection CriteriaLOWEST ENERGY
Conformers Calculated Total Number50
Conformers Submitted Total Number42
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR3.851BRUNGER
2structure solutionVNMR 4.3 AND5.2
3structure solutionANSIG V.3.2V.3.2
4structure solutionX-PLOR3.851