Annotations: 9RWM

Crystal structure of human ADAMTS-5 Cb and Spacer domains

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF05986	ADAM-TS Spacer 1 (ADAMTS_spacer1)	ADAM-TS Spacer 1	This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like proteins [1]. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase) and is a s ...	This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like proteins [1]. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase) and is a subfamily of the metalloprotease family, sharing a high degree of sequence similarity and conserved domain organisation among its members [2,3]. Members of the ADAM-TS family have been implicated in a range of diseases [4,7]. ADAM-TS-like proteins lack a metalloprotease domain. They resides in the ECM and have regulatory roles [4]. Examples of ADAM-TS-like proteins are papilin [5] and punctin [6].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	A disintegrin and metalloproteinase with thrombospondin motifs 5	peptidase activity catalytic activity, acting on a protein metallopeptidase activity hydrolase activity catalytic activity extracellular matrix binding binding metalloendopeptidase activity endopeptidase activity cell adhesion molecule binding protein-containing complex binding protein binding integrin binding signaling receptor binding peptidase activity catalytic activity, acting on a protein metallopeptidase activity hydrolase activity catalytic activity extracellular matrix binding binding metalloendopeptidase activity endopeptidase activity cell adhesion molecule binding protein-containing complex binding protein binding integrin binding signaling receptor binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding heparin binding glycosaminoglycan binding carbohydrate derivative binding sulfur compound binding identical protein binding	cellular component organization extracellular matrix organization cellular process cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization cellular component disassembly extracellular matrix disassembly developmental process heart development multicellular organismal process heart valve development animal organ development aortic valve development cellular component organization extracellular matrix organization cellular process cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization cellular component disassembly extracellular matrix disassembly developmental process heart development multicellular organismal process heart valve development animal organ development aortic valve development circulatory system development multicellular organism development anatomical structure morphogenesis heart valve morphogenesis anatomical structure development semi-lunar valve development aortic valve morphogenesis system development mesenchyme morphogenesis endocardial cushion morphogenesis heart morphogenesis mesenchyme development tissue development tissue morphogenesis endocardial cushion development animal organ morphogenesis pulmonary valve morphogenesis pulmonary valve development cellular developmental process myoblast fusion cell-cell fusion syncytium formation by cell-cell fusion muscle cell differentiation myotube differentiation muscle structure development cell differentiation striated muscle cell differentiation regulation of biological process negative regulation of cold-induced thermogenesis homeostatic process negative regulation of biological process biological regulation adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis regulation of multicellular organismal process negative regulation of multicellular organismal process proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	extracellular matrix cellular anatomical structure external encapsulating structure extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle organelle lumen organelle extracellular matrix cellular anatomical structure external encapsulating structure extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle organelle lumen organelle endoplasmic reticulum cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR013273	ADAMTS/ADAMTS-like	Family
A, B, C	IPR001590	Peptidase M12B, ADAM/reprolysin	Domain
A, B, C	IPR000884	Thrombospondin type-1 (TSP1) repeat	Repeat
A, B, C	IPR041645	ADAMTS, cysteine-rich domain 2	Domain
A, B, C	IPR010294	ADAMTS/ADAMTS-like, Spacer 1	Domain
A, B, C	IPR024079	Metallopeptidase, catalytic domain superfamily	Homologous Superfamily
A, B, C	IPR013276	Peptidase M12B, ADAM-TS5	Family
A, B, C	IPR045371	ADAMTS/ADAMTS-like, cysteine-rich domain 3	Domain
A, B, C	IPR036383	Thrombospondin type-1 repeat superfamily	Homologous Superfamily
A, B, C	IPR006586	ADAM, cysteine-rich domain	Domain
A, B, C	IPR050439	ADAMTS and ADAMTS-like	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C	: Q9UNA0	Hepatomegaly astrocytic tumor cystic fibrosis malignant ependymoma osteoarthritis pancreatic intraductal papillary-mucinous carcinoma ulcerative colitis breast cancer Down syndrome intervertebral disc degenerative disorder medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm breast carcinoma ductal breast carcinoma in situ Hepatomegaly astrocytic tumor cystic fibrosis malignant ependymoma osteoarthritis pancreatic intraductal papillary-mucinous carcinoma ulcerative colitis breast cancer Down syndrome intervertebral disc degenerative disorder medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm breast carcinoma ductal breast carcinoma in situ invasive ductal breast carcinoma oligodendroglioma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9RWM | pdb_00009rwm

Crystal structure of human ADAMTS-5 Cb and Spacer domains

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation