9OTI | pdb_00009oti

GATOR2 complex bound to arginine sensor CASTOR1

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
I [auth L],
P [auth T]		PF17034Zinc-ribbon like family (zinc_ribbon_16)Zinc-ribbon like family- Family
A,
B,
I [auth L],
P [auth T]		PF21719MIOS, alpha-solenoid (MIOS_a-sol)MIOS, alpha-solenoid- Repeat
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
H,
O [auth R]		PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
Q [auth U],
R [auth V]		PF21389Cytosolic arginine sensor for mTORC1 subunit 1/2, ACT-like (CASTOR1_ACT-like)Cytosolic arginine sensor for mTORC1 subunit 1/2, ACT-likeThis domain is found in Cytosolic arginine sensor for mTORC1 subunit 1 from humans (CASTOR1) and in similar proteins predominantly from vertebrates. CASTOR1 functions as an intracellular arginine sensor within the amino acid-sensing branch of the TOR ...This domain is found in Cytosolic arginine sensor for mTORC1 subunit 1 from humans (CASTOR1) and in similar proteins predominantly from vertebrates. CASTOR1 functions as an intracellular arginine sensor within the amino acid-sensing branch of the TORC1 signaling pathway. This entry represents the third out of the four tandem ACT domains present in this protein. This domain adopts the typical beta-alpha- beta-beta-alpha-beta configuration of the ACT domain, although it lacks the last beta-strand. It folds together with the first ACT domain to form an eight-stranded beta-sheet flanked by four alpha- helices on one side, making up the dimerization domain [1,4].
Domain
Q [auth U],
R [auth V]		PF18700Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain (Castor1_N)Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domainCASTOR1 (Cytosolic arginine sensor for mTORC1 subunit 1) has been identified as the cytosolic arginine sensor for the mTORC1 pathway. In the absence of arginine, CASTOR1 binds to GATOR2 and inhibits mTORC1 signaling; whereas in the presence of argini ...CASTOR1 (Cytosolic arginine sensor for mTORC1 subunit 1) has been identified as the cytosolic arginine sensor for the mTORC1 pathway. In the absence of arginine, CASTOR1 binds to GATOR2 and inhibits mTORC1 signaling; whereas in the presence of arginine, CASTOR1 interacts with arginine and no longer associates with GATOR2. The arginine sits in a pocket between the N-terminal domain (NTD) and the C-terminal domain (CTD) of CASTOR1. The CASTOR1-NTD on the opposite side of the arginine-binding site was identified to mediate direct physical interaction with its downstream effector GATOR2, via GATOR2 subunit Mios [1].
Domain
Q [auth U],
R [auth V]		PF13840ACT domain (ACT_7)ACT domainThe ACT domain is a structural motif of 70-90 amino acids that functions in the control of metabolism, solute transport and signal transduction. They are thus found in a variety of different proteins in a variety of different arrangements [1]. In mam ...The ACT domain is a structural motif of 70-90 amino acids that functions in the control of metabolism, solute transport and signal transduction. They are thus found in a variety of different proteins in a variety of different arrangements [1]. In mammalian phenylalanine hydroxylase the domain forms no contacts but promotes an allosteric effect despite the apparent lack of ligand binding [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
I [auth L],
P [auth T]		GATOR2 complex protein MIOS
C,
J [auth M]		GATOR complex protein WDR24
D,
K [auth N]		GATOR complex protein WDR59
Nucleoporin SEH1
H,
O [auth R]		Protein SEC13 homolog
Q [auth U],
R [auth V]		Cytosolic arginine sensor for mTORC1 subunit 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
I [auth L],
P [auth T]		IPR037593MIOS/Sea4Family
A,
B,
I [auth L],
P [auth T]		IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
A,
B,
I [auth L],
P [auth T]		IPR031488GATOR2 complex protein MIO, zinc-ribbon like domainDomain
A,
B,
I [auth L],
P [auth T]		IPR001680WD40 repeatRepeat
A,
B,
I [auth L],
P [auth T]		IPR049092MIOS-like, alpha-solenoid domainDomain
A,
B,
I [auth L],
P [auth T]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
C,
J [auth M]		IPR019775WD40 repeat, conserved siteConserved Site
C,
J [auth M]		IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
C,
J [auth M]		IPR001680WD40 repeatRepeat
C,
J [auth M]		IPR037590GATOR2 complex protein WDR24Family
C,
J [auth M]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D,
K [auth N]		IPR049566WDR59/RTC1-like, RING zinc finger domainDomain
D,
K [auth N]		IPR016135Ubiquitin-conjugating enzyme/RWD-likeHomologous Superfamily
D,
K [auth N]		IPR049567GATOR complex protein WDR59-likeFamily
D,
K [auth N]		IPR019775WD40 repeat, conserved siteConserved Site
D,
K [auth N]		IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D,
K [auth N]		IPR039456WDR59, modified RING finger, H2 subclass, C3H3C2-typeDomain
D,
K [auth N]		IPR001680WD40 repeatRepeat
D,
K [auth N]		IPR006575RWD domainDomain
D,
K [auth N]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR037363Sec13/Seh1 familyFamily
IPR001680WD40 repeatRepeat
H,
O [auth R]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
H,
O [auth R]		IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
H,
O [auth R]		IPR037363Sec13/Seh1 familyFamily
H,
O [auth R]		IPR001680WD40 repeatRepeat
Q [auth U],
R [auth V]		IPR040778CASTOR1, N-terminalDomain
Q [auth U],
R [auth V]		IPR045865ACT-like domainHomologous Superfamily
Q [auth U],
R [auth V]		IPR026249CASTOR familyFamily
Q [auth U],
R [auth V]		IPR027795CASTOR, ACT domainDomain
Q [auth U],
R [auth V]		IPR051719Cytosolic arginine sensor for mTORC1Family
Q [auth U],
R [auth V]		IPR049479Cytosolic arginine sensor for mTORC1 subunit 1/2, ACT-likeDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
B,
I [auth L],
P [auth T]		Pharos:  Q9NXC5
C,
J [auth M]		Pharos:  Q96S15
D,
K [auth N]		Pharos:  Q6PJI9
Pharos:  Q96EE3
H,
O [auth R]		Pharos:  P55735
Q [auth U],
R [auth V]		Pharos:  Q8WTX7