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 9NAQ | pdb_00009naq

Cryo-EM structure of 110_C4 Fab in complex with CIDRa1.7 PfEMP1

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth L]TIRe9naqL1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: TIRECOD (v295.2)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth L]Light ChainIGLV10 Lambdaerythrocyte membrane protein 1SAbDab (2026-09-25)
A [auth H]Heavy ChainIGHV1 -erythrocyte membrane protein 1SAbDab (2026-09-25)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth A]Erythrocyte membrane protein 1 -
B [auth L]110_C4 Fab light chain---
A [auth H]110_C4 Fab heavy chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A]IPR008602Duffy-antigen binding domainDomain
C [auth A]IPR004258Duffy-binding-like domainDomain
C [auth A]IPR044932Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segment superfamilyHomologous Superfamily
C [auth A]IPR049158PfEMP1, CIDRalpha1 domainDomain
C [auth A]IPR042202Duffy-antigen binding superfamilyHomologous Superfamily
C [auth A]IPR029211Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segmentDomain
C [auth A]IPR029210Plasmodium falciparum erythrocyte membrane protein-1, N-terminal segmentDomain
C [auth A]IPR041480Cysteine-rich interdomain region 1 gammaDomain
C [auth A]IPR054595Duffy-binding-like domain, C-terminal subdomainDomain