Crystal Structure of Thermus thermophilus KhpB/EloR complexed with RNA
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth B] | e9lriB2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth B], C [auth A] | PF01424 | R3H domain (R3H) | R3H domain | The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to be binding ssDNA. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth C] | RNA (5'-R(P*CP*CP*CP*CP*CP*CP*C)-3') | - | - | - |
| A [auth B], C [auth A] | Probable DNA/RNA-binding protein (Jag-related protein) | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth B], C [auth A] | IPR015946 | K homology domain-like, alpha/beta | Homologous Superfamily |
| A [auth B], C [auth A] | IPR038008 | Jag, KH domain | Domain |
| A [auth B], C [auth A] | IPR034079 | RNA-binding protein KhpB, R3H domain | Domain |
| A [auth B], C [auth A] | IPR039247 | RNA-binding protein KhpB | Family |
| A [auth B], C [auth A] | IPR036867 | R3H domain superfamily | Homologous Superfamily |
| A [auth B], C [auth A] | IPR001374 | R3H domain | Domain |
