9LKL | pdb_00009lkl

Cryo-EM map of C1ql1-gC1q hexamer and BAI3-eCUB complex

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, F, G A, B, C, F, G, H	C1q-related factor	protein binding binding signaling receptor binding	developmental process multicellular organismal process cellular developmental process cell development developmental maturation nervous system development generation of neurons neurogenesis multicellular organism development neuron differentiation neuron remodeling anatomical structure maturation cell differentiation neuron development anatomical structure development developmental process multicellular organismal process cellular developmental process cell development developmental maturation nervous system development generation of neurons neurogenesis multicellular organism development neuron differentiation neuron remodeling anatomical structure maturation cell differentiation neuron development anatomical structure development neuron maturation cellular process cell maturation system development cellular component disassembly regulation of synapse pruning regulation of biological process regulation of cellular component organization regulation of cellular process cell junction disassembly synapse pruning biological regulation cellular component organization regulation of synapse organization cell junction organization regulation of synapse structure or activity synapse organization cellular component organization or biogenesis regulation of biological quality behavior system process learning learning or memory nervous system process motor learning cognition maintenance of synapse structure cell junction maintenance cellular component maintenance	protein-containing complex collagen trimer axon cell projection cellular anatomical structure neuron projection climbing fiber plasma membrane bounded cell projection synaptic cleft extracellular region presynapse synapse cell junction intracellular anatomical structure protein-containing complex collagen trimer axon cell projection cellular anatomical structure neuron projection climbing fiber plasma membrane bounded cell projection synaptic cleft extracellular region presynapse synapse cell junction intracellular anatomical structure cytoplasm cerebellar climbing fiber to Purkinje cell synapse neuron to neuron synapse asymmetric synapse glutamatergic synapse excitatory synapse asymmetric, glutamatergic, excitatory synapse
D, E, I, J	Adhesion G protein-coupled receptor B3	molecular transducer activity G protein-coupled receptor activity transmembrane signaling receptor activity signaling receptor activity GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity	positive regulation of nervous system development multicellular organismal process regulation of cellular process positive regulation of cellular component organization regulation of cellular component organization regulation of developmental process positive regulation of biological process regulation of nervous system development positive regulation of developmental process cellular component organization cellular component biogenesis multicellular organism development cellular component assembly cell junction assembly anatomical structure development positive regulation of nervous system development multicellular organismal process regulation of cellular process positive regulation of cellular component organization regulation of cellular component organization regulation of developmental process positive regulation of biological process regulation of nervous system development positive regulation of developmental process cellular component organization cellular component biogenesis multicellular organism development cellular component assembly cell junction assembly anatomical structure development regulation of multicellular organismal process regulation of synapse structure or activity synapse organization cellular component organization or biogenesis regulation of synapse assembly regulation of biological quality positive regulation of cellular process system development developmental process regulation of multicellular organismal development regulation of biological process positive regulation of cellular component biogenesis biological regulation nervous system development regulation of cellular component biogenesis regulation of cell junction assembly positive regulation of cell junction assembly regulation of synapse organization cell junction organization positive regulation of multicellular organismal process cellular process synapse assembly positive regulation of synapse assembly cellular developmental process cell development developmental maturation generation of neurons neurogenesis neuron differentiation neuron remodeling anatomical structure maturation cell differentiation neuron development neuron maturation cell maturation cellular component disassembly regulation of synapse pruning cell junction disassembly synapse pruning maintenance of synapse structure cell junction maintenance cellular component maintenance cellular response to stimulus response to stimulus signaling adenylate cyclase-activating G protein-coupled receptor signaling pathway cell communication adenylate cyclase-modulating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway signal transduction synapse maturation regulation of synapse maturation cell surface receptor signaling pathway myoblast fusion cell-cell fusion muscle cell differentiation myotube differentiation muscle structure development syncytium formation by plasma membrane fusion anatomical structure morphogenesis anatomical structure formation involved in morphogenesis syncytium formation striated muscle cell differentiation regulation of neuron projection development cell projection organization plasma membrane bounded cell projection morphogenesis neuron projection development cell morphogenesis cell projection morphogenesis dendrite development neuron projection morphogenesis regulation of dendrite morphogenesis regulation of anatomical structure morphogenesis plasma membrane bounded cell projection organization regulation of cell projection organization dendrite morphogenesis cell morphogenesis involved in neuron differentiation regulation of dendrite development regulation of plasma membrane bounded cell projection organization negative regulation of biological process angiogenesis regulation of vasculature development tube morphogenesis blood vessel development blood vessel morphogenesis tube development negative regulation of blood vessel morphogenesis negative regulation of developmental process negative regulation of angiogenesis vasculature development circulatory system development negative regulation of vasculature development regulation of angiogenesis negative regulation of multicellular organismal process behavior system process learning learning or memory nervous system process motor learning cognition	postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic membrane asymmetric synapse plasma membrane region synaptic cleft extracellular region cerebellar climbing fiber to Purkinje cell synapse glutamatergic synapse excitatory synapse asymmetric, glutamatergic, excitatory synapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, F, G A, B, C, F, G, H	IPR008160	Collagen triple helix repeat	Repeat
A, B, C, F, G A, B, C, F, G, H	IPR008983	Tumour necrosis factor-like domain superfamily	Homologous Superfamily
A, B, C, F, G A, B, C, F, G, H	IPR001073	C1q domain	Domain
A, B, C, F, G A, B, C, F, G, H	IPR050822	Cerebellin Synaptic Organizer	Family
D, E, I, J	IPR017983	GPCR, family 2, secretin-like, conserved site	Conserved Site
D, E, I, J	IPR036445	GPCR family 2, extracellular hormone receptor domain superfamily	Homologous Superfamily
D, E, I, J	IPR000832	GPCR, family 2, secretin-like	Family
D, E, I, J	IPR000203	GPS motif	Conserved Site
D, E, I, J	IPR000859	CUB domain	Domain
D, E, I, J	IPR017981	GPCR, family 2-like, 7TM	Domain
D, E, I, J	IPR008077	GPCR, family 2, brain-specific angiogenesis inhibitor	Family
D, E, I, J	IPR000884	Thrombospondin type-1 (TSP1) repeat	Repeat
D, E, I, J	IPR001879	GPCR, family 2, extracellular hormone receptor domain	Domain
D, E, I, J	IPR036383	Thrombospondin type-1 repeat superfamily	Homologous Superfamily
D, E, I, J	IPR043838	Adhesion G protein-coupled receptor B, N-terminal domain	Domain
D, E, I, J	IPR032471	AGRL2-4 , GAIN subdomain A	Domain
D, E, I, J	IPR046338	GAIN domain superfamily	Homologous Superfamily
D, E, I, J	IPR057244	GAIN, subdomain B	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
D, E, I, J	Pharos: O60242	astrocytic tumor large cell medulloblastoma malignant glioma pancreatic intraductal papillary-mucinous carcinoma subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor lung adenocarcinoma medulloblastoma pancreatic intraductal papillary-mucinous neoplasm glioblastoma malignant ependymoma non-small cell lung carcinoma primitive neuroectodermal tumor

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.