Annotations: 9JA5

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF08593	Mug135-like, C-terminal domain (Mug135_C)	Mug135-like, C-terminal domain	This entry represents the C-terminal domain found in Meiotically up-regulated gene 135 protein from Schizosaccharomyces pombe (Mug135, also known as Tdk1, O74876) and similar fungal proteins that are annotated as meiotically up-regulated gene product ...	This entry represents the C-terminal domain found in Meiotically up-regulated gene 135 protein from Schizosaccharomyces pombe (Mug135, also known as Tdk1, O74876) and similar fungal proteins that are annotated as meiotically up-regulated gene products. Mug135 is a killer meiotic driver (KMD), a selfish genetic element that by selectively kills meiotic products lacking its gene, thereby promoting its own propagation. This protein exists in a nontoxic tetrameric form during vegetative growth and meiosis but transforms into a distinct toxic form in spores [1,2]. These proteins generally contain a long coiled-coil region with this domain found at the C-terminus.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Meiotically up-regulated gene 135 protein,SWR1 complex bromodomain subunit bdf1,Immunoglobulin G-binding protein G	protein-containing complex binding binding immunoglobulin binding IgG binding chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity	reproductive process meiotic drive sexual reproduction meiotic cell cycle cellular process cell cycle regulation of cellular process positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process positive regulation of gene expression, epigenetic cellular component organization RNA biosynthetic process nucleobase-containing compound metabolic process reproductive process meiotic drive sexual reproduction meiotic cell cycle cellular process cell cycle regulation of cellular process positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process positive regulation of gene expression, epigenetic cellular component organization RNA biosynthetic process nucleobase-containing compound metabolic process positive regulation of metabolic process DNA-templated transcription nucleic acid biosynthetic process transcription by RNA polymerase II positive regulation of biosynthetic process chromatin organization chromatin remodeling positive regulation of macromolecule metabolic process cellular component organization or biogenesis positive regulation of cellular process transcription initiation at RNA polymerase II promoter regulation of biosynthetic process regulation of biological process epigenetic regulation of gene expression biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process DNA-templated transcription initiation regulation of gene expression biosynthetic process positive regulation of gene expression transcription initiation-coupled chromatin remodeling regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of primary metabolic process regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of DNA-templated transcription cellular response to stimulus DNA repair-dependent chromatin remodeling response to stimulus cellular response to stress DNA damage response response to stress	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen extracellular region ATPase complex membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen extracellular region ATPase complex protein-containing complex nuclear protein-containing complex nuclear chromosome chromosome histone deacetylase complex membraneless organelle SWI/SNF superfamily-type complex INO80-type complex catalytic complex intracellular membraneless organelle chromatin Swr1 complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR013902	Mug135-like, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR009063	Immunoglobulin/albumin-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR019950	M protein-type anchor domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR005877	YSIRK Gram-positive signal peptide	Domain
A, B, C, D, E A, B, C, D, E, F	IPR000724	IgG-binding B	Domain
A, B, C, D, E A, B, C, D, E, F	IPR035152	GA-like domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR019931	LPXTG cell wall anchor domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR027353	NET domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR043509	Brdt, bromodomain, repeat II	Domain
A, B, C, D, E A, B, C, D, E, F	IPR018359	Bromodomain, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F	IPR001487	Bromodomain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR036427	Bromodomain-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR050935	Bromodomain-containing chromatin reader	Family
A, B, C, D, E A, B, C, D, E, F	IPR038336	NET domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.