9HAN | pdb_00009han

Bovine collagen VI local refinement of C-terminal region

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A], E [auth D]	PF00092	von Willebrand factor type A domain (VWA)	von Willebrand factor type A domain		Domain
C [auth B], F [auth E]	PF00092	von Willebrand factor type A domain (VWA)	von Willebrand factor type A domain		Domain
A [auth C], D [auth F]	PF00092	von Willebrand factor type A domain (VWA)	von Willebrand factor type A domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth A], E [auth D]	Collagen type VI alpha 1 chain	-	developmental process myotube cell development skeletal muscle fiber development cellular developmental process skeletal muscle tissue development animal organ development cell development tissue development muscle cell differentiation myotube differentiation striated muscle tissue development muscle structure development skeletal muscle organ development striated muscle cell development muscle cell development developmental process myotube cell development skeletal muscle fiber development cellular developmental process skeletal muscle tissue development animal organ development cell development tissue development muscle cell differentiation myotube differentiation striated muscle tissue development muscle structure development skeletal muscle organ development striated muscle cell development muscle cell development cell differentiation anatomical structure development cellular process muscle tissue development muscle organ development striated muscle cell differentiation anatomical structure morphogenesis cell adhesion	protein-containing complex collagen trimer cellular anatomical structure extracellular region membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum cytoplasm intracellular membrane-bounded organelle endomembrane system
C [auth B], F [auth E]	Collagen type VI alpha 2 chain	collagen binding protein-containing complex binding binding	neuron apoptotic process cellular process apoptotic process cell death programmed cell death response to light stimulus response to stimulus response to radiation response to abiotic stimulus response to UV cellular response to stimulus regulation of biological process regulation of cellular process signaling neuron apoptotic process cellular process apoptotic process cell death programmed cell death response to light stimulus response to stimulus response to radiation response to abiotic stimulus response to UV cellular response to stimulus regulation of biological process regulation of cellular process signaling biological regulation intracellular signal transduction cell communication intracellular signaling cassette signal transduction phosphatidylinositol 3-kinase/protein kinase B signal transduction cell adhesion	protein-containing complex collagen trimer cellular anatomical structure extracellular region cell periphery sarcolemma plasma membrane membrane extracellular matrix external encapsulating structure
A [auth C], D [auth F]	Collagen type VI alpha 3 chain	enzyme regulator activity molecular function inhibitor activity peptidase regulator activity serine-type endopeptidase inhibitor activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity	cell adhesion cellular process	protein-containing complex collagen trimer cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth A], E [auth D]	IPR008160	Collagen triple helix repeat	Repeat
B [auth A], E [auth D]	IPR050525	Extracellular Matrix Assembly and Organization	Family
B [auth A], E [auth D]	IPR002035	von Willebrand factor, type A	Domain
B [auth A], E [auth D]	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
C [auth B], F [auth E]	IPR008160	Collagen triple helix repeat	Repeat
C [auth B], F [auth E]	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
C [auth B], F [auth E]	IPR002035	von Willebrand factor, type A	Domain
C [auth B], F [auth E]	IPR052229	Collagen VI and Biomineralization Protein PIF	Family
A [auth C], D [auth F]	IPR008160	Collagen triple helix repeat	Repeat
A [auth C], D [auth F]	IPR003961	Fibronectin type III	Domain
A [auth C], D [auth F]	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
A [auth C], D [auth F]	IPR020901	Proteinase inhibitor I2, Kunitz, conserved site	Conserved Site
A [auth C], D [auth F]	IPR036880	Pancreatic trypsin inhibitor Kunitz domain superfamily	Homologous Superfamily
A [auth C], D [auth F]	IPR002223	Pancreatic trypsin inhibitor Kunitz domain	Domain
A [auth C], D [auth F]	IPR050525	Extracellular Matrix Assembly and Organization	Family
A [auth C], D [auth F]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A [auth C], D [auth F]	IPR002035	von Willebrand factor, type A	Domain
A [auth C], D [auth F]	IPR041900	Collagen alpha-3(VI) chain, vWA domain	Domain
A [auth C], D [auth F]	IPR036116	Fibronectin type III superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.