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9E8Z
|
pdb_00009e8z
4-component structure of retron Ec83
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
E [auth J]
RNA (38-MER)
-
-
-
D [auth I]
DNA (79-MER), msDNA
-
-
-
C [auth H]
Retron Ec83 reverse transcriptase
RNA-directed DNA polymerase activity
catalytic activity, acting on DNA
DNA polymerase activity
catalytic activity, acting on a nucleic acid
transferase activity
nucleotidyltransferase activity
catalytic activity
transferase activity, transferring phosphorus-containing groups
RNA binding
binding
nucleic acid binding
cation binding
ion binding
metal ion binding
RNA-directed DNA polymerase activity
catalytic activity, acting on DNA
DNA polymerase activity
catalytic activity, acting on a nucleic acid
transferase activity
nucleotidyltransferase activity
catalytic activity
transferase activity, transferring phosphorus-containing groups
RNA binding
binding
nucleic acid binding
cation binding
ion binding
metal ion binding
small molecule binding
Less
biological process involved in interspecies interaction between organisms
defense response to virus
response to stimulus
defense response
response to other organism
response to stress
response to external stimulus
response to external biotic stimulus
response to virus
response to biotic stimulus
-
B [auth E]
,
G [auth B]
Retron Ec83 putative HNH endonuclease
hydrolase activity
catalytic activity
endonuclease activity
nuclease activity
catalytic activity, acting on a nucleic acid
biological process involved in interspecies interaction between organisms
defense response to virus
response to stimulus
defense response
response to other organism
response to stress
response to external stimulus
response to external biotic stimulus
response to virus
response to biotic stimulus
-
A [auth C]
,
F [auth A]
,
H [auth D]
,
I [auth F]
Retron Ec83 probable ATPase
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
small molecule binding
Less
cellular response to stimulus
double-strand break repair
response to stimulus
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
metabolic process
cellular process
macromolecule metabolic process
DNA repair
cellular response to stimulus
double-strand break repair
response to stimulus
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
metabolic process
cellular process
macromolecule metabolic process
DNA repair
biological process involved in interspecies interaction between organisms
defense response to virus
defense response
response to other organism
response to external stimulus
response to external biotic stimulus
response to virus
response to biotic stimulus
nucleobase-containing compound biosynthetic process
DNA synthesis involved in DNA repair
macromolecule biosynthetic process
nucleic acid biosynthetic process
biosynthetic process
DNA biosynthetic process
Less
-
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
C [auth H]
IPR000477
Reverse transcriptase domain
Domain
C [auth H]
IPR051083
Group II Intron Splicing and Mobility/Defense
Family
C [auth H]
IPR000123
RNA-directed DNA polymerase (reverse transcriptase), msDNA
Family
C [auth H]
IPR043502
DNA/RNA polymerase superfamily
Homologous Superfamily
B [auth E]
,
G [auth B]
IPR013467
Retron Ec78 putative HNH endonuclease-like
Family
A [auth C]
,
F [auth A]
,
H [auth D]
,
I [auth F]
IPR053498
Retron-associated ATPase
Family
A [auth C]
,
F [auth A]
,
H [auth D]
,
I [auth F]
IPR003593
AAA+ ATPase domain
Domain
A [auth C]
,
F [auth A]
,
H [auth D]
,
I [auth F]
IPR041685
Endonuclease GajA/Old nuclease/RecF-like, AAA domain
Domain
A [auth C]
,
F [auth A]
,
H [auth D]
,
I [auth F]
IPR027417
P-loop containing nucleoside triphosphate hydrolase
Homologous Superfamily
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