9A0F | pdb_00009a0f

Integrative model of the wild type yeast nuclear pore complex


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Nup82
Dyn2
Nup120
Nup85
Seh1
Sec13
Nup145c
Nup84
Nup170
Nup192
I1, I2, I3, I4
Nup49
H1, H2, H3, H4
Nup57
Nup157
Nup188
A1, A2, A3, A4
Nic96
J1, J2, J3, J4, J5
Nsp1
Nup159
Nup133

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR037700Nucleoporin NUP88/NUP82Family
IPR037177Dynein light chain superfamilyHomologous Superfamily
IPR001372Dynein light chain, type 1/2Family
IPR019763Dynein light chain, type 1/2, conserved siteConserved Site
IPR021717Nucleoporin Nup120/160Family
IPR055090Nucleoporin NUP120, helical domain, saccharomycetesDomain
IPR059141Nucleoporin Nup120/160, beta-propeller domainDomain
IPR056548Nucleoporin nup120-like, HEAT repeat domain, fungalDomain
IPR011502Nucleoporin Nup85-likeFamily
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR037363Sec13/Seh1 familyFamily
IPR001680WD40 repeatRepeat
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR037363Sec13/Seh1 familyFamily
IPR001680WD40 repeatRepeat
IPR025574Nucleoporin FG repeatRepeat
IPR037665Nucleoporin peptidase S59-likeFamily
IPR036903Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyHomologous Superfamily
IPR007230Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainDomain
IPR021967Nuclear pore complex protein NUP96, C-terminal domainDomain
IPR007252Nuclear pore protein 84/107Family
IPR042537Nucleoporin, Nup155-like, C-terminal, subdomain 2Homologous Superfamily
IPR042533Nucleoporin, Nup155-like, C-terminal, subdomain 1Homologous Superfamily
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalDomain
IPR004870Nucleoporin, Nup155-likeFamily
IPR007187Nucleoporin, Nup133/Nup155-like, C-terminalDomain
IPR021827Nucleoporin Nup186/Nup192/Nup205Family
I1, I2, I3, I4
IPR024882Nucleoporin p58/p45/NUP49Family
I1, I2, I3, I4
IPR025574Nucleoporin FG repeatRepeat
H1, H2, H3, H4
IPR025574Nucleoporin FG repeatRepeat
H1, H2, H3, H4
IPR024864Nucleoporin Nup54/Nup57/Nup44Family
H1, H2, H3, H4
IPR025712Nucleoporin Nup54, alpha-helical domainDomain
IPR042537Nucleoporin, Nup155-like, C-terminal, subdomain 2Homologous Superfamily
IPR042533Nucleoporin, Nup155-like, C-terminal, subdomain 1Homologous Superfamily
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalDomain
IPR004870Nucleoporin, Nup155-likeFamily
IPR007187Nucleoporin, Nup133/Nup155-like, C-terminalDomain
IPR044840Nucleoporin Nup188Family
IPR041634Nuclear pore protein Nup188, C-terminalDomain
IPR048883Nucleoporin Nup188, N-terminal subdomain IIIDomain
IPR018864Nucleoporin Nup188, N-terminalDomain
A1, A2, A3, A4
IPR007231Nucleoporin interacting component Nup93/Nic96Family
J1, J2, J3, J4, J5
IPR007758Nucleoporin, NSP1-like, C-terminalDomain
J1, J2, J3, J4, J5
IPR026010Nucleoporin NSP1/NUP62Family
IPR039462Nucleoporin Nup159/Nup146, N-terminalDomain
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR037624Nuclear pore complex protein Nup133-likeFamily
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalDomain