8YMJ | pdb_00008ymj

Cryo-EM structure of Hepatitis B virus surface antigen subviral particle with D2 symmetry

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth a], AB [auth 1], AC [auth AQ], B, A, AA [auth a], AB [auth 1], AC [auth AQ], B, BA [auth b], BB [auth 2], BC [auth AR], C, CA [auth c], CB [auth 3], D, DA [auth d], DB [auth 4], E, EA [auth e], EB [auth 5], F, FA [auth f], FB [auth 6], G, GA [auth g], GB [auth 7], H, HA [auth h], HB [auth 8], I, IA [auth i], IB [auth 9], J, JA [auth j], JB [auth 0], K, KA [auth k], KB [auth AA], L, LA [auth l], LB [auth AB], M, MA [auth m], MB [auth AC], N, NA [auth n], NB [auth AD], O, OA [auth o], OB [auth AE], P, PA [auth p], PB [auth AF], Q, QA [auth q], QB [auth AG], R, RA [auth r], RB [auth AH], S, SA [auth s], SB [auth AI], T, TA [auth t], TB [auth AJ], U, UA [auth u], UB [auth AK], V, VA [auth v], VB [auth AL], W, WA [auth w], WB [auth AM], X, XA [auth x], XB [auth AN], Y, YA [auth y], YB [auth AO], Z, ZA [auth z], ZB [auth AP]	PF00695	Major surface antigen from hepadnavirus (vMSA)	Major surface antigen from hepadnavirus	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], AB [auth 1], AC [auth AQ], B, A, AA [auth a], AB [auth 1], AC [auth AQ], B, BA [auth b], BB [auth 2], BC [auth AR], C, CA [auth c], CB [auth 3], D, DA [auth d], DB [auth 4], E, EA [auth e], EB [auth 5], F, FA [auth f], FB [auth 6], G, GA [auth g], GB [auth 7], H, HA [auth h], HB [auth 8], I, IA [auth i], IB [auth 9], J, JA [auth j], JB [auth 0], K, KA [auth k], KB [auth AA], L, LA [auth l], LB [auth AB], M, MA [auth m], MB [auth AC], N, NA [auth n], NB [auth AD], O, OA [auth o], OB [auth AE], P, PA [auth p], PB [auth AF], Q, QA [auth q], QB [auth AG], R, RA [auth r], RB [auth AH], S, SA [auth s], SB [auth AI], T, TA [auth t], TB [auth AJ], U, UA [auth u], UB [auth AK], V, VA [auth v], VB [auth AL], W, WA [auth w], WB [auth AM], X, XA [auth x], XB [auth AN], Y, YA [auth y], YB [auth AO], Z, ZA [auth z], ZB [auth AP]	Isoform S of Large envelope protein	-	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction import into cell receptor-mediated endocytosis of virus by host cell transport establishment of localization viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction import into cell receptor-mediated endocytosis of virus by host cell transport establishment of localization caveolin-mediated endocytosis vesicle-mediated transport localization symbiont entry into host cell caveolin-mediated endocytosis of virus by host cell symbiont entry into host cellular process endocytosis involved in viral entry into host cell receptor-mediated endocytosis endocytosis	virion component viral membrane viral envelope cellular anatomical structure membrane virion membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], AB [auth 1], AC [auth AQ], B, A, AA [auth a], AB [auth 1], AC [auth AQ], B, BA [auth b], BB [auth 2], BC [auth AR], C, CA [auth c], CB [auth 3], D, DA [auth d], DB [auth 4], E, EA [auth e], EB [auth 5], F, FA [auth f], FB [auth 6], G, GA [auth g], GB [auth 7], H, HA [auth h], HB [auth 8], I, IA [auth i], IB [auth 9], J, JA [auth j], JB [auth 0], K, KA [auth k], KB [auth AA], L, LA [auth l], LB [auth AB], M, MA [auth m], MB [auth AC], N, NA [auth n], NB [auth AD], O, OA [auth o], OB [auth AE], P, PA [auth p], PB [auth AF], Q, QA [auth q], QB [auth AG], R, RA [auth r], RB [auth AH], S, SA [auth s], SB [auth AI], T, TA [auth t], TB [auth AJ], U, UA [auth u], UB [auth AK], V, VA [auth v], VB [auth AL], W, WA [auth w], WB [auth AM], X, XA [auth x], XB [auth AN], Y, YA [auth y], YB [auth AO], Z, ZA [auth z], ZB [auth AP]	IPR000349	Large envelope protein S	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.