8WUL | pdb_00008wul

Crystal structure of affinity enhanced TCR in complex with HLA-A*11:01 bound to KRAS-G12V peptide (VVGAVGVGK)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
M [auth J]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054541 3000071 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054541 3000071 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054541 3000071 SCOP2B (2022-06-29)
A [auth C]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054541 3000071 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth M],
M [auth J],
P,
S		PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
I [auth L],
L [auth I],
O,
R		PF00129Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I)Class I Histocompatibility antigen, domains alpha 1 and 2Domain
I [auth L],
L [auth I],
O,
R		PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
A [auth C],
C [auth A],
E,
G		PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
A [auth C],
C [auth A],
E,
G		PF09291Domain of unknown function (DUF1968) (DUF1968)Domain of unknown function (DUF1968)Members of this family are found in mammalian T-cell antigen receptor, and adopt an immunoglobulin-like beta-sandwich fold, with seven strands in two beta-sheets in a Greek-key topology. Their exact function has not, as yet, been determined. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
K [auth N],
N [auth K],
Q,
T		KRAS-G12V nonamer peptide
J [auth M],
M [auth J],
P,
S		Beta-2-microglobulin
I [auth L],
L [auth I],
O,
R		MHC class I antigen-
B [auth D],
D [auth B],
F,
H		TCR beta chain---
A [auth C],
C [auth A],
E,
G		TCR alpha chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
K [auth N],
N [auth K],
Q,
T		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
K [auth N],
N [auth K],
Q,
T		IPR020849Small GTPase, Ras-typeFamily
K [auth N],
N [auth K],
Q,
T		IPR005225Small GTP-binding domainDomain
K [auth N],
N [auth K],
Q,
T		IPR001806Small GTPaseFamily
J [auth M],
M [auth J],
P,
S		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
J [auth M],
M [auth J],
P,
S		IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
J [auth M],
M [auth J],
P,
S		IPR013783Immunoglobulin-like foldHomologous Superfamily
J [auth M],
M [auth J],
P,
S		IPR007110Immunoglobulin-like domainDomain
J [auth M],
M [auth J],
P,
S		IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
J [auth M],
M [auth J],
P,
S		IPR003597Immunoglobulin C1-setDomain
J [auth M],
M [auth J],
P,
S		IPR015707Beta-2-MicroglobulinFamily
I [auth L],
L [auth I],
O,
R		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
I [auth L],
L [auth I],
O,
R		IPR050208Antigen-presenting and immune regulatory MHC class I-relatedFamily
I [auth L],
L [auth I],
O,
R		IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily
I [auth L],
L [auth I],
O,
R		IPR003597Immunoglobulin C1-setDomain
I [auth L],
L [auth I],
O,
R		IPR010579MHC class I, alpha chain, C-terminalDomain
I [auth L],
L [auth I],
O,
R		IPR013783Immunoglobulin-like foldHomologous Superfamily
I [auth L],
L [auth I],
O,
R		IPR011161MHC class I-like antigen recognition-likeDomain
I [auth L],
L [auth I],
O,
R		IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
I [auth L],
L [auth I],
O,
R		IPR007110Immunoglobulin-like domainDomain
I [auth L],
L [auth I],
O,
R		IPR001039MHC class I alpha chain, alpha1 alpha2 domainsDomain
I [auth L],
L [auth I],
O,
R		IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A [auth C],
C [auth A],
E,
G		IPR013783Immunoglobulin-like foldHomologous Superfamily
A [auth C],
C [auth A],
E,
G		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A [auth C],
C [auth A],
E,
G		IPR015370T-cell receptor alpha chain, constant domainDomain
A [auth C],
C [auth A],
E,
G		IPR051006T cell receptor variable domainFamily
A [auth C],
C [auth A],
E,
G		IPR013783Immunoglobulin-like foldHomologous Superfamily
A [auth C],
C [auth A],
E,
G		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A [auth C],
C [auth A],
E,
G		IPR013106Immunoglobulin V-set domainDomain
A [auth C],
C [auth A],
E,
G		IPR007110Immunoglobulin-like domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
K [auth N],
N [auth K],
Q,
T		Pharos:  P01116
J [auth M],
M [auth J],
P,
S		Pharos:  P61769