8TW4 | pdb_00008tw4

TCR in nanodisc ND-I

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth D]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054849 3000071 SCOP2B (2022-06-29)
D [auth F]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054845 3000071 SCOP2B (2022-06-29)
C [auth E]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054845 3000071 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054547 3000071 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth G]PF16680T-cell surface glycoprotein CD3 delta chain (Ig_4)T-cell surface glycoprotein CD3 delta chainThis is an immunoglobulin-like domain. It is found on the T-cell surface glycoprotein CD3 delta chain. CD3delta and CD3epsilon complex together as part of the T-cell receptor complex [1]. Domain
E [auth D]PF16680T-cell surface glycoprotein CD3 delta chain (Ig_4)T-cell surface glycoprotein CD3 delta chainThis is an immunoglobulin-like domain. It is found on the T-cell surface glycoprotein CD3 delta chain. CD3delta and CD3epsilon complex together as part of the T-cell receptor complex [1]. Domain
C [auth E],
D [auth F]		PF16681Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain (Ig_5)Ig-like domain on T-cell surface glycoprotein CD3 epsilon chainIg_5 is an immunoglobulin domain found on T-cell surface glycoprotein CD3 epsilon chain. It forms a first-order complex with T-cell surface glycoprotein CD3 delta chain as part of the T-cell receptor complex [1]. Domain
PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
PF09291Domain of unknown function (DUF1968) (DUF1968)Domain of unknown function (DUF1968)Members of this family are found in mammalian T-cell antigen receptor, and adopt an immunoglobulin-like beta-sandwich fold, with seven strands in two beta-sheets in a Greek-key topology. Their exact function has not, as yet, been determined. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
G [auth X],
H [auth Y]		T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L
F [auth G]T-cell surface glycoprotein CD3 gamma chain
E [auth D]T-cell surface glycoprotein CD3 delta chain
C [auth E],
D [auth F]		T-cell surface glycoprotein CD3 epsilon chain
T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein
TCR alpha-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth X],
H [auth Y]		IPR014023Mononegavirales RNA-directed RNA polymerase catalytic domainDomain
G [auth X],
H [auth Y]		IPR025786Mononegavirus L protein 2-O-ribose methyltransferaseDomain
G [auth X],
H [auth Y]		IPR026890Mononegavirales mRNA-capping domain VDomain
G [auth X],
H [auth Y]		IPR016269RNA-directed RNA polymerase, paramyxovirusFamily
G [auth X],
H [auth Y]		IPR000786Green fluorescent protein, GFPFamily
G [auth X],
H [auth Y]		IPR011584Green fluorescent protein-relatedFamily
G [auth X],
H [auth Y]		IPR039736RNA-directed RNA polymerase L, C-terminalDomain
G [auth X],
H [auth Y]		IPR009017Green fluorescent proteinHomologous Superfamily
G [auth X],
H [auth Y]		IPR039530RNA-directed RNA polymerase L methyltransferase domain, rhabdovirusDomain
G [auth X],
H [auth Y]		IPR024128T-cell surface glycoprotein CD3 zeta subunitFamily
G [auth X],
H [auth Y]		IPR003110Phosphorylated immunoreceptor signalling ITAMRepeat
G [auth X],
H [auth Y]		IPR021663T-cell surface glycoprotein CD3 zeta subunit/High affinity IgE receptor gamma subunitFamily
F [auth G]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
F [auth G]IPR003598Immunoglobulin subtype 2Domain
F [auth G]IPR032052CD3 gamma/delta subunit, Ig-like domainDomain
F [auth G]IPR015484CD3 protein, epsilon/gamma/delta subunitFamily
F [auth G]IPR013783Immunoglobulin-like foldHomologous Superfamily
F [auth G]IPR003110Phosphorylated immunoreceptor signalling ITAMRepeat
E [auth D]IPR032052CD3 gamma/delta subunit, Ig-like domainDomain
E [auth D]IPR015484CD3 protein, epsilon/gamma/delta subunitFamily
E [auth D]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
E [auth D]IPR013783Immunoglobulin-like foldHomologous Superfamily
E [auth D]IPR003110Phosphorylated immunoreceptor signalling ITAMRepeat
C [auth E],
D [auth F]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
C [auth E],
D [auth F]		IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth E],
D [auth F]		IPR003110Phosphorylated immunoreceptor signalling ITAMRepeat
C [auth E],
D [auth F]		IPR003598Immunoglobulin subtype 2Domain
C [auth E],
D [auth F]		IPR015484CD3 protein, epsilon/gamma/delta subunitFamily
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
IPR013106Immunoglobulin V-set domainDomain
IPR007110Immunoglobulin-like domainDomain
IPR050413T cell receptor beta variableFamily
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
IPR050413T cell receptor beta variableFamily
IPR003597Immunoglobulin C1-setDomain
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR013106Immunoglobulin V-set domainDomain
IPR003599Immunoglobulin domain subtypeDomain
IPR007110Immunoglobulin-like domainDomain
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
IPR015370T-cell receptor alpha chain, constant domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
G [auth X],
H [auth Y]		Pharos:  P20963
F [auth G]Pharos:  P09693
E [auth D]Pharos:  P04234
C [auth E],
D [auth F]		Pharos:  P07766
Pharos:  A0A0K0K1A5
Pharos:  P01848