8TVA | pdb_00008tva

Outer Mat-T4P complex

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], FA [auth CO], GA [auth CP], HA [auth CQ], IA [auth CR], JA [auth CS], KA [auth CT], LA [auth CU], MA [auth CV], NA [auth CW], OA [auth CX], V [auth CE], W [auth CF], X [auth CG], Y [auth CH], Z [auth CI]	PF00114	Pilin (bacterial filament) (Pilin)	Pilin (bacterial filament)	Proteins with only the short N-terminal methylation site are not separated from the noise. The Prosite pattern detects those better.	Domain
B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], G [auth BP], H [auth BQ], I [auth BR], J [auth BS], K [auth BT], L [auth BU], M [auth BV], N [auth BW], O [auth BX], P [auth BY], Q [auth BZ], R [auth CA], S [auth CB], T [auth CC], U [auth CD]	PF07963	Prokaryotic N-terminal methylation motif (N_methyl)	Prokaryotic N-terminal methylation motif	-	Motif
B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], G [auth BP], H [auth BQ], I [auth BR], J [auth BS], K [auth BT], L [auth BU], M [auth BV], N [auth BW], O [auth BX], P [auth BY], Q [auth BZ], R [auth CA], S [auth CB], T [auth CC], U [auth CD]	PF00114	Pilin (bacterial filament) (Pilin)	Pilin (bacterial filament)	Proteins with only the short N-terminal methylation site are not separated from the noise. The Prosite pattern detects those better.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth b]	Maturation protein	-	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction virion attachment to host cell pilus symbiont entry into host cell viral process symbiont entry into host	virion component
AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], FA [auth CO], GA [auth CP], HA [auth CQ], IA [auth CR], JA [auth CS], KA [auth CT], LA [auth CU], MA [auth CV], NA [auth CW], OA [auth CX], V [auth CE], W [auth CF], X [auth CG], Y [auth CH], Z [auth CI]	Fimbrial protein	-	protein transport across the cell outer membrane establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport across the cell outer membrane establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization cell adhesion	cellular anatomical structure membrane protein-containing complex type II protein secretion system complex pilus cell projection
B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], G [auth BP], H [auth BQ], I [auth BR], J [auth BS], K [auth BT], L [auth BU], M [auth BV], N [auth BW], O [auth BX], P [auth BY], Q [auth BZ], R [auth CA], S [auth CB], T [auth CC], U [auth CD]	Fimbrial protein	-	protein transport across the cell outer membrane establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport across the cell outer membrane establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization cell adhesion	cellular anatomical structure membrane protein-containing complex type II protein secretion system complex pilus cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth b]	IPR005563	Assembly protein	Family
AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], FA [auth CO], GA [auth CP], HA [auth CQ], IA [auth CR], JA [auth CS], KA [auth CT], LA [auth CU], MA [auth CV], NA [auth CW], OA [auth CX], V [auth CE], W [auth CF], X [auth CG], Y [auth CH], Z [auth CI]	IPR050470	T4P/T2SS_Core	Unknown
AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], FA [auth CO], GA [auth CP], HA [auth CQ], IA [auth CR], JA [auth CS], KA [auth CT], LA [auth CU], MA [auth CV], NA [auth CW], OA [auth CX], V [auth CE], W [auth CF], X [auth CG], Y [auth CH], Z [auth CI]	IPR000983	General secretion pathway protein G-type pilin	Family
AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], FA [auth CO], GA [auth CP], HA [auth CQ], IA [auth CR], JA [auth CS], KA [auth CT], LA [auth CU], MA [auth CV], NA [auth CW], OA [auth CX], V [auth CE], W [auth CF], X [auth CG], Y [auth CH], Z [auth CI]	IPR012902	Prokaryotic N-terminal methylation site	PTM
AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], FA [auth CO], GA [auth CP], HA [auth CQ], IA [auth CR], JA [auth CS], KA [auth CT], LA [auth CU], MA [auth CV], NA [auth CW], OA [auth CX], V [auth CE], W [auth CF], X [auth CG], Y [auth CH], Z [auth CI]	IPR001082	Fimbrial protein pilin	Family
AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], AA [auth CJ], BA [auth CK], CA [auth CL], DA [auth CM], EA [auth CN], FA [auth CO], GA [auth CP], HA [auth CQ], IA [auth CR], JA [auth CS], KA [auth CT], LA [auth CU], MA [auth CV], NA [auth CW], OA [auth CX], V [auth CE], W [auth CF], X [auth CG], Y [auth CH], Z [auth CI]	IPR045584	Pilin-like	Homologous Superfamily
B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], G [auth BP], H [auth BQ], I [auth BR], J [auth BS], K [auth BT], L [auth BU], M [auth BV], N [auth BW], O [auth BX], P [auth BY], Q [auth BZ], R [auth CA], S [auth CB], T [auth CC], U [auth CD]	IPR050470	T4P/T2SS_Core	Unknown
B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], G [auth BP], H [auth BQ], I [auth BR], J [auth BS], K [auth BT], L [auth BU], M [auth BV], N [auth BW], O [auth BX], P [auth BY], Q [auth BZ], R [auth CA], S [auth CB], T [auth CC], U [auth CD]	IPR000983	General secretion pathway protein G-type pilin	Family
B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], G [auth BP], H [auth BQ], I [auth BR], J [auth BS], K [auth BT], L [auth BU], M [auth BV], N [auth BW], O [auth BX], P [auth BY], Q [auth BZ], R [auth CA], S [auth CB], T [auth CC], U [auth CD]	IPR012902	Prokaryotic N-terminal methylation site	PTM
B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], G [auth BP], H [auth BQ], I [auth BR], J [auth BS], K [auth BT], L [auth BU], M [auth BV], N [auth BW], O [auth BX], P [auth BY], Q [auth BZ], R [auth CA], S [auth CB], T [auth CC], U [auth CD]	IPR001082	Fimbrial protein pilin	Family
B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], B [auth BK], C [auth BL], D [auth BM], E [auth BN], F [auth BO], G [auth BP], H [auth BQ], I [auth BR], J [auth BS], K [auth BT], L [auth BU], M [auth BV], N [auth BW], O [auth BX], P [auth BY], Q [auth BZ], R [auth CA], S [auth CB], T [auth CC], U [auth CD]	IPR045584	Pilin-like	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.