8OIR

55S human mitochondrial ribosome with mtRF1 and P-site tRNA


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
R [auth BI]SCOP2B SuperfamilyZn-binding ribosomal proteins8075050 3001320 SCOP2B (2022-06-29)
W [auth BN]SCOP2B SuperfamilyRibosomal protein L48080706 3001146 SCOP2B (2022-06-29)
AA [auth BR]SCOP2B SuperfamilyRibosomal protein L138100460 3001134 SCOP2B (2022-06-29)
BA [auth BS]SCOP2B Superfamily50S Ribosomal protein L14-like8072072 3000433 SCOP2B (2022-06-29)
EA [auth BV]SCOP2B SuperfamilyProkaryotic ribosomal protein L178033689 3000995 SCOP2B (2022-06-29)
TA [auth Bl]SCOP2B SuperfamilyRibosomal protein L368083324 3001346 SCOP2B (2022-06-29)
YA [auth Bq]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like8053893 3002240 SCOP2B (2022-06-29)
RB [auth AJ]SCOP2B SuperfamilyNucleic acid-binding proteins8095431 3000135 SCOP2B (2022-06-29)
SB [auth AK]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052599 3000068 SCOP2B (2022-06-29)
YB [auth AQ]SCOP2B SuperfamilyRibosomal protein S218053089 3002159 SCOP2B (2022-06-29)
ZB [auth AR]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like8051932 3002074 SCOP2B (2022-06-29)
GC [auth AY]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like8090914 3002471 SCOP2B (2022-06-29)
JC [auth Ab]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063850 3001397 SCOP2B (2022-06-29)
OC [auth Ai]SCOP2B SuperfamilyTranslational machinery components8098948 3000571 SCOP2B (2022-06-29)
PC [auth Aj]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8091481 3000334 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B1]PF16320e8oirB11 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
B [auth B2]PF16320e8oirB21 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
C [auth B3]PF16320e8oirB31 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
D [auth B4]PF16320e8oirB41 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
E [auth B5]PF16320e8oirB51 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
F [auth B6]PF16320e8oirB61 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
O [auth BF]PF06984e8oirBF1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF06984ECOD (1.6)
P [auth BG]PF00327e8oirBG1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
Q [auth BH]PF01783e8oirBH1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
R [auth BI]PF00471e8oirBI1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
S [auth BJ]PF00468e8oirBJ1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
T [auth BK]PF01632e8oirBK1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
U [auth BL]PF00181e8oirBL2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
U [auth BL]PF03947e8oirBL1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
V [auth BM]PF00297e8oirBM1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
W [auth BN]PF00573e8oirBN1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
X [auth BO]PF01281e8oirBO2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
X [auth BO]PF22078e8oirBO1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF22078ECOD (1.6)
Z [auth BQ]PF00298e8oirBQ1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
Z [auth BQ]PF03946e8oirBQ2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
AA [auth BR]PF00572e8oirBR1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
BA [auth BS]PF00238e8oirBS1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
CA [auth BT]PF00828e8oirBT1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
DA [auth BU]PF00252e8oirBU1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
FA [auth BW]PF00861e8oirBW1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
GA [auth BX]PF01245e8oirBX1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
HA [auth BY]PF00453e8oirBY1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
IA [auth BZ]PF00829e8oirBZ1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
JA [auth Ba]PF18699e8oirBa1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: PF18699ECOD (1.6)
KA [auth Bb]PF10780e8oirBb1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF10780ECOD (1.6)
NA [auth Be]PF14978e8oirBe1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: PF14978ECOD (1.6)
OA [auth Bf]PF00472e8oirBf1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
QA [auth Bh]PF01084e8oirBh1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
RA [auth Bi]PF07147e8oirBi1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
SA [auth Bj]F_UNCLASSIFIEDe8oirBj1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: F_UNCLASSIFIEDECOD (1.6)
TA [auth Bl]PF00444e8oirBl1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
UA [auth Bm]PF07147e8oirBm1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
VA [auth Bn]PF01161e8oirBn1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PF01161ECOD (1.6)
WA [auth Bo]PF02824e8oirBo1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF02824ECOD (1.6)
WA [auth Bo]F_UNCLASSIFIEDe8oirBo2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: F_UNCLASSIFIEDECOD (1.6)
YA [auth Bq]PF09809e8oirBq1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: PF09809ECOD (1.6)
ZA [auth Br]PF10210e8oirBr1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: PF10210ECOD (1.6)
AB [auth Bs]PF05047e8oirBs1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
BB [auth Bt]PF22935e8oirBt1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: PF22935ECOD (1.6)
BB [auth Bt]PF22892e8oirBt2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF22892ECOD (1.6)
J [auth BA]PF00237e8oirBA1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
CB [auth Bu]PF04280e8oirBu1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF04280ECOD (1.6)
DB [auth Bv]PF11788e8oirBv1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: PF11788ECOD (1.6)
EB [auth Bw]PF00338e8oirBw1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
FB [auth Bx]PF05046e8oirBx1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: PF05046ECOD (1.6)
GB [auth By]PF10501e8oirBy1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF10501ECOD (1.6)
HB [auth Bz]PF10244e8oirBz1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: PF10244ECOD (1.6)
JB [auth AB]PF10213e8oirAB1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF10213ECOD (1.6)
KB [auth AC]PF14955e8oirAC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF14955ECOD (1.6)
LB [auth AD]PF08213e8oirAD1 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: PF08213ECOD (1.6)
K [auth BB]PF00276e8oirBB1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
MB [auth AE]PF01250e8oirAE1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
NB [auth AF]PF00177e8oirAF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
PB [auth AH]PF00338e8oirAH1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
RB [auth AJ]PF00164e8oirAJ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
SB [auth AK]PF00253e8oirAK1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
TB [auth AL]PF00312e8oirAL1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
UB [auth AM]PF00886e8oirAM1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
VB [auth AN]PF00366e8oirAN1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
L [auth BC]PF00467,PF17136e8oirBC1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
WB [auth AO]PF01084e8oirAO1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
XB [auth AP]PF01084e8oirAP1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
YB [auth AQ]PF01165e8oirAQ1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
ZB [auth AR]PF10245e8oirAR1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: PF10245ECOD (1.6)
AC [auth AS]PF10484e8oirAS1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: PF10484ECOD (1.6)
BC [auth AT]PF05047e8oirAT1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
CC [auth AU]PF14943e8oirAU1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: PF14943ECOD (1.6)
DC [auth AV]PF10037e8oirAV1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF10037ECOD (1.6)
EC [auth AW]PF10246e8oirAW1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF10246ECOD (1.6)
FC [auth AX]PF10236e8oirAX1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF10236ECOD (1.6)
FC [auth AX]PF10236e8oirAX2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF10236ECOD (1.6)
M [auth BD]PF01016e8oirBD1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
HC [auth AZ]PF08293e8oirAZ1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: PF08293ECOD (1.6)
IC [auth Aa]PF03462e8oirAa2 A: alpha bundlesX: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology)H: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology)T: Release factor (Pfam 00472) N-terminal alpha helical domainF: PF03462ECOD (1.6)
IC [auth Aa]PF03462e8oirAa1 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin-like domain in release factor (From Topology)T: Ferredoxin-like domain in release factorF: PF03462ECOD (1.6)
IC [auth Aa]F_UNCLASSIFIEDe8oirAa3 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: F_UNCLASSIFIEDECOD (1.6)
IC [auth Aa]PF00472e8oirAa4 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
JC [auth Ab]PF00318e8oirAb1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
KC [auth Ac]PF06747e8oirAc1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
LC [auth Ad]PF03719e8oirAd3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
LC [auth Ad]PF00333e8oirAd2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
LC [auth Ad]PF21251e8oirAd1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF21251ECOD (1.6)
NC [auth Ag]PF00380e8oirAg1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
OC [auth Ai]PF00411e8oirAi1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
PC [auth Aj]PF16053e8oirAj1 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: PF16053ECOD (1.6)
N [auth BE]PF00830e8oirBE1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1].Domain
O [auth BF]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
P [auth BG]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
Q [auth BH]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
R [auth BI]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
S [auth BJ]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
T [auth BK]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
U [auth BL]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
U [auth BL]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
V [auth BM]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
W [auth BN]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
X [auth BO]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
Y [auth BP]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
Z [auth BQ]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
Z [auth BQ]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
AA [auth BR]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
BA [auth BS]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
CA [auth BT]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
DA [auth BU]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
EA [auth BV]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
FA [auth BW]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
GA [auth BX]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
HA [auth BY]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
IA [auth BZ]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
JA [auth Ba]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
KA [auth Bb]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
LA [auth Bc]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
MA [auth Bd]PF09776Mitochondrial ribosomal protein L55 (Mitoc_L55)Mitochondrial ribosomal protein L55- Family
NA [auth Be]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
PA [auth Bg]PF10147Growth arrest and DNA-damage-inducible proteins-interacting protein 1 (CR6_interact)Growth arrest and DNA-damage-inducible proteins-interacting protein 1- Family
QA [auth Bh]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
RA [auth Bi]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
SA [auth Bj]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
TA [auth Bl]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
UA [auth Bm]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
VA [auth Bn]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding protein- Domain
XA [auth Bp]PF09812Mitochondrial ribosomal protein L28 (MRP-L28)Mitochondrial ribosomal protein L28- Family
YA [auth Bq]PF09809Mitochondrial ribosomal protein L27 (MRP-L27)Mitochondrial ribosomal protein L27- Family
ZA [auth Br]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
AB [auth Bs]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
J [auth BA]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CB [auth Bu]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
DB [auth Bv]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
EB [auth Bw]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
FB [auth Bx]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].Domain
GB [auth By]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
HB [auth Bz]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
JB [auth AB]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
KB [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
LB [auth AD]PF08213Mitochondrial mRNA-processing protein COX24, C-terminal (COX24_C)Mitochondrial mRNA-processing protein COX24, C-terminalThis domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is ...This domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is a component of the mitochondrial ribosome (mitoribosome), responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane [2,3]. This domain is also found in COX24 mammalian homologue Aurora kinase A-interacting protein [4]. This entry also includes uncharacterised proteins from bacteria.
Domain
K [auth BB]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
MB [auth AE]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
NB [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
PB [auth AH]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
RB [auth AJ]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
SB [auth AK]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
TB [auth AL]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
UB [auth AM]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
VB [auth AN]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
L [auth BC]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
L [auth BC]PF00467KOW motif (KOW)KOW motif- Family
WB [auth AO]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
XB [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
YB [auth AQ]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
ZB [auth AR]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
AC [auth AS]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
BC [auth AT]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
CC [auth AU]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
DC [auth AV]PF10037Mitochondrial 28S ribosomal protein S27 (MRP-S27)Mitochondrial 28S ribosomal protein S27- Repeat
EC [auth AW]PF10246Mitochondrial ribosomal protein MRP-S35 (MRP-S35)Mitochondrial ribosomal protein MRP-S35- Family
FC [auth AX]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
M [auth BD]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
GC [auth AY]PF15433Mitochondrial 28S ribosomal protein S31 (MRP-S31)Mitochondrial 28S ribosomal protein S31- Family
HC [auth AZ]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
IC [auth Aa]PF03462PCRF domain (PCRF)PCRF domainThis domain is found in peptide chain release factors.Domain
IC [auth Aa]PF00472RF-1 domain (RF-1)RF-1 domain- Family
JC [auth Ab]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
KC [auth Ac]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
LC [auth Ad]PF2125140S ribosomal protein rpS2 (S5p), N-terminal (S5p_N)40S ribosomal protein rpS2 (S5p), N-terminalThis entry represents an extension found at the N-terminal of mammalian 28S ribosomal protein S5 [1,2]. This lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].Domain
LC [auth Ad]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
LC [auth Ad]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
MC [auth Ae]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
MC [auth Ae]PF13041PPR repeat family (PPR_2)PPR repeat family- Repeat
NC [auth Ag]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
OC [auth Ai]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
PC [auth Aj]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
N [auth BE]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
39S ribosomal protein L12, mitochondrial
O [auth BF]39S ribosomal protein L47, mitochondrial
P [auth BG]39S ribosomal protein L30, mitochondrial
Q [auth BH]39S ribosomal protein L32, mitochondrial
R [auth BI]39S ribosomal protein L33, mitochondrial
S [auth BJ]39S ribosomal protein L34, mitochondrial
T [auth BK]39S ribosomal protein L35, mitochondrial
U [auth BL]39S ribosomal protein L2, mitochondrial
V [auth BM]39S ribosomal protein L3, mitochondrial
W [auth BN]39S ribosomal protein L4, mitochondrial
X [auth BO]39S ribosomal protein L9, mitochondrial
G [auth B7]E-site tRNA---
Y [auth BP]39S ribosomal protein L10, mitochondrial
Z [auth BQ]39S ribosomal protein L11, mitochondrial
AA [auth BR]39S ribosomal protein L13, mitochondrial
BA [auth BS]39S ribosomal protein L14, mitochondrial
CA [auth BT]39S ribosomal protein L15, mitochondrial
DA [auth BU]39S ribosomal protein L16, mitochondrial
EA [auth BV]39S ribosomal protein L17, mitochondrial
FA [auth BW]39S ribosomal protein L18, mitochondrial
GA [auth BX]39S ribosomal protein L19, mitochondrial
HA [auth BY]39S ribosomal protein L20, mitochondrial
H [auth B8]16S rRNA---
IA [auth BZ]39S ribosomal protein L21, mitochondrial
JA [auth Ba]39S ribosomal protein L52, mitochondrial
KA [auth Bb]39S ribosomal protein L53, mitochondrial-
LA [auth Bc]39S ribosomal protein L54, mitochondrial
MA [auth Bd]39S ribosomal protein L55, mitochondrial
NA [auth Be]Ribosomal protein 63, mitochondrial
OA [auth Bf]Peptidyl-tRNA hydrolase ICT1, mitochondrial
PA [auth Bg]Growth arrest and DNA damage-inducible proteins-interacting protein 1-
QA [auth Bh]39S ribosomal protein S18a, mitochondrial
RA [auth Bi]39S ribosomal protein S30, mitochondrial
I [auth B9]CP Val-tRNA(Val)---
SA [auth Bj]39S ribosomal protein L1, mitochondrial
TA [auth Bl]39S ribosomal protein L36, mitochondrial
UA [auth Bm]39S ribosomal protein L37, mitochondrial
VA [auth Bn]39S ribosomal protein L38, mitochondrial-
WA [auth Bo]39S ribosomal protein L39, mitochondrial
XA [auth Bp]39S ribosomal protein L40, mitochondrial
YA [auth Bq]39S ribosomal protein L41, mitochondrial
ZA [auth Br]39S ribosomal protein L42, mitochondrial
AB [auth Bs]39S ribosomal protein L43, mitochondrial
BB [auth Bt]39S ribosomal protein L44, mitochondrial
J [auth BA]39S ribosomal protein L22, mitochondrial
CB [auth Bu]39S ribosomal protein L45, mitochondrial
DB [auth Bv]39S ribosomal protein L46, mitochondrial
EB [auth Bw]39S ribosomal protein L48, mitochondrial-
FB [auth Bx]39S ribosomal protein L49, mitochondrial
GB [auth By]39S ribosomal protein L50, mitochondrial-
HB [auth Bz]39S ribosomal protein L51, mitochondrial
IB [auth AA]12S rRNA---
JB [auth AB]28S ribosomal protein S35, mitochondrial
KB [auth AC]28S ribosomal protein S24, mitochondrial
LB [auth AD]Aurora kinase A-interacting protein-
K [auth BB]39S ribosomal protein L23, mitochondrial
MB [auth AE]28S ribosomal protein S6, mitochondrial
NB [auth AF]28S ribosomal protein S7, mitochondrial
OB [auth AG]P-site Met-tRNA(Met)---
PB [auth AH]28S ribosomal protein S10, mitochondrial-
QB [auth AI]mRNA---
RB [auth AJ]28S ribosomal protein S12, mitochondrial
SB [auth AK]28S ribosomal protein S14, mitochondrial
TB [auth AL]28S ribosomal protein S15, mitochondrial
UB [auth AM]28S ribosomal protein S16, mitochondrial
VB [auth AN]28S ribosomal protein S17, mitochondrial
L [auth BC]39S ribosomal protein L24, mitochondrial
WB [auth AO]28S ribosomal protein S18b, mitochondrial
XB [auth AP]28S ribosomal protein S18c, mitochondrial
YB [auth AQ]28S ribosomal protein S21, mitochondrial
ZB [auth AR]28S ribosomal protein S22, mitochondrial
AC [auth AS]28S ribosomal protein S23, mitochondrial
BC [auth AT]28S ribosomal protein S25, mitochondrial
CC [auth AU]28S ribosomal protein S26, mitochondrial
DC [auth AV]28S ribosomal protein S27, mitochondrial
EC [auth AW]28S ribosomal protein S28, mitochondrial
FC [auth AX]28S ribosomal protein S29, mitochondrial
M [auth BD]39S ribosomal protein L27, mitochondrial
GC [auth AY]28S ribosomal protein S31, mitochondrial
HC [auth AZ]28S ribosomal protein S33, mitochondrial
IC [auth Aa]Peptide chain release factor 1, mitochondrial
JC [auth Ab]28S ribosomal protein S2, mitochondrial
KC [auth Ac]Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
LC [auth Ad]28S ribosomal protein S5, mitochondrial
MC [auth Ae]Pentatricopeptide repeat domain-containing protein 3, mitochondrial
NC [auth Ag]28S ribosomal protein S9, mitochondrial
OC [auth Ai]28S ribosomal protein S11, mitochondrial
PC [auth Aj]28S ribosomal protein S34, mitochondrial
N [auth BE]39S ribosomal protein L28, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family
O [auth BF]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
O [auth BF]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
P [auth BG]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
P [auth BG]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
P [auth BG]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Q [auth BH]IPR002677Large ribosomal subunit protein bL32Family
Q [auth BH]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
R [auth BI]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
R [auth BI]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
R [auth BI]IPR001705Large ribosomal subunit protein bL33Family
S [auth BJ]IPR000271Large ribosomal subunit protein bL34Family
T [auth BK]IPR021137Large ribosomal subunit protein bL35-likeFamily
T [auth BK]IPR019338Large ribosomal subunit protein bL35mFamily
T [auth BK]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
U [auth BL]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
U [auth BL]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth BL]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
U [auth BL]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
U [auth BL]IPR002171Large ribosomal subunit protein uL2Family
V [auth BM]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
V [auth BM]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
V [auth BM]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
V [auth BM]IPR000597Large ribosomal subunit protein uL3Family
W [auth BN]IPR013005Large ribosomal subunit protein uL4-likeFamily
W [auth BN]IPR002136Large ribosomal subunit protein uL4Family
W [auth BN]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
X [auth BO]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
X [auth BO]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
X [auth BO]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
X [auth BO]IPR000244Large ribosomal subunit protein bL9Family
Y [auth BP]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
Y [auth BP]IPR001790Large ribosomal subunit protein uL10Family
Y [auth BP]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
Z [auth BQ]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
Z [auth BQ]IPR000911Ribosomal protein uL11Family
Z [auth BQ]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
Z [auth BQ]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
Z [auth BQ]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
Z [auth BQ]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
AA [auth BR]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
AA [auth BR]IPR005822Large ribosomal subunit protein uL13Family
AA [auth BR]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
AA [auth BR]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
BA [auth BS]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
BA [auth BS]IPR000218Large ribosomal subunit protein uL14Family
CA [auth BT]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
CA [auth BT]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth BT]IPR030878Large ribosomal subunit protein uL15Family
CA [auth BT]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth BU]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
DA [auth BU]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
DA [auth BU]IPR016180Large ribosomal subunit protein uL16 domainDomain
DA [auth BU]IPR047873Large ribosomal subunit protein uL16Family
EA [auth BV]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
EA [auth BV]IPR000456Large ribosomal subunit protein bL17Family
FA [auth BW]IPR005484Large ribosomal subunit protein uL18Family
FA [auth BW]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
GA [auth BX]IPR001857Large ribosomal subunit protein bL19Family
GA [auth BX]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
GA [auth BX]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HA [auth BY]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
HA [auth BY]IPR005813Large ribosomal subunit protein bL20Family
IA [auth BZ]IPR028909Large ribosomal subunit protein bL21-likeFamily
IA [auth BZ]IPR001787Large ribosomal subunit protein bL21Family
IA [auth BZ]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
JA [auth Ba]IPR034596Large ribosomal subunit protein mL52Family
KA [auth Bb]IPR019716Large ribosomal subunit protein mL53Family
LA [auth Bc]IPR013870Large ribosomal subunit protein mL54Family
MA [auth Bd]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
MA [auth Bd]IPR018615Large ribosomal subunit protein mL55Family
NA [auth Be]IPR016576Large ribosomal subunit protein mL63Family
OA [auth Bf]IPR000352Peptide chain release factor class IDomain
PA [auth Bg]IPR018472Large ribosomal subunit protein mL64Family
PA [auth Bg]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
QA [auth Bh]IPR001648Small ribosomal subunit protein bS18Family
QA [auth Bh]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
RA [auth Bi]IPR039982Large ribosomal subunit protein mL65Family
RA [auth Bi]IPR010793Large ribosomal subunit protein mL37/mL65Family
SA [auth Bj]IPR005879Large ribosomal subunit protein uL1, mitochondrialFamily
SA [auth Bj]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
SA [auth Bj]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
SA [auth Bj]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
TA [auth Bl]IPR000473Large ribosomal subunit protein bL36Family
TA [auth Bl]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
UA [auth Bm]IPR010793Large ribosomal subunit protein mL37/mL65Family
VA [auth Bn]IPR036610PEBP-like superfamilyHomologous Superfamily
VA [auth Bn]IPR008914Phosphatidylethanolamine-binding proteinFamily
VA [auth Bn]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
WA [auth Bo]IPR012676TGS-likeHomologous Superfamily
WA [auth Bo]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
WA [auth Bo]IPR004095TGSDomain
WA [auth Bo]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
XA [auth Bp]IPR019192Large ribosomal subunit protein mL40Family
XA [auth Bp]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
YA [auth Bq]IPR019189Large ribosomal subunit protein mL41Family
ZA [auth Br]IPR019346Large ribosomal subunit protein mL42Family
AB [auth Bs]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
AB [auth Bs]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
AB [auth Bs]IPR039927Large ribosomal subunit protein mL43Family
BB [auth Bt]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
BB [auth Bt]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
BB [auth Bt]IPR014720Double-stranded RNA-binding domainDomain
J [auth BA]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
J [auth BA]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
J [auth BA]IPR001063Large ribosomal subunit protein uL22Family
CB [auth Bu]IPR032710NTF2-like domain superfamilyHomologous Superfamily
CB [auth Bu]IPR007379Tim44-like domainDomain
DB [auth Bv]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
DB [auth Bv]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
DB [auth Bv]IPR040008Large ribosomal subunit protein mL46Family
DB [auth Bv]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
EB [auth Bw]IPR027486Small ribosomal subunit protein uS10 domainDomain
EB [auth Bw]IPR027487Large ribosomal subunit protein mL48Family
EB [auth Bw]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
FB [auth Bx]IPR007740Large ribosomal subunit protein mL49Family
GB [auth By]IPR018305Large ribosomal subunit protein mL50Family
HB [auth Bz]IPR019373Large ribosomal subunit protein mL51Family
JB [auth AB]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
JB [auth AB]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
KB [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
LB [auth AD]IPR013177Ribosomal protein mS38, C-terminalDomain
K [auth BB]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
K [auth BB]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
K [auth BB]IPR013025Large ribosomal subunit protein uL23-likeFamily
MB [auth AE]IPR000529Small ribosomal subunit protein bS6Family
MB [auth AE]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
MB [auth AE]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
NB [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
NB [auth AF]IPR000235Small ribosomal subunit protein uS7Family
NB [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
PB [auth AH]IPR027486Small ribosomal subunit protein uS10 domainDomain
PB [auth AH]IPR040055Small ribosomal subunit protein uS10mFamily
PB [auth AH]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
RB [auth AJ]IPR006032Small ribosomal subunit protein uS12Family
RB [auth AJ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RB [auth AJ]IPR005679Ribosomal protein uS12, bacterial-typeFamily
SB [auth AK]IPR001209Small ribosomal subunit protein uS14Family
TB [auth AL]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
TB [auth AL]IPR000589Small ribosomal subunit protein uS15Family
TB [auth AL]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
UB [auth AM]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
UB [auth AM]IPR000307Small ribosomal subunit protein bS16Family
VB [auth AN]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
VB [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VB [auth AN]IPR000266Small ribosomal subunit protein uS17Family
L [auth BC]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth BC]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth BC]IPR003256Large ribosomal subunit protein uL24Family
L [auth BC]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
L [auth BC]IPR005824KOWDomain
L [auth BC]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
WB [auth AO]IPR040054Small ribosomal subunit protein mS40Family
WB [auth AO]IPR001648Small ribosomal subunit protein bS18Family
WB [auth AO]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
XB [auth AP]IPR001648Small ribosomal subunit protein bS18Family
XB [auth AP]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
XB [auth AP]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
YB [auth AQ]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
YB [auth AQ]IPR001911Small ribosomal subunit protein bS21Family
ZB [auth AR]IPR019374Small ribosomal subunit protein mS22Family
AC [auth AS]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
AC [auth AS]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
BC [auth AT]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
BC [auth AT]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
BC [auth AT]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
CC [auth AU]IPR026140Small ribosomal subunit protein mS26Family
DC [auth AV]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
DC [auth AV]IPR002885Pentatricopeptide repeatRepeat
DC [auth AV]IPR019266Small ribosomal subunit protein mS27Family
DC [auth AV]IPR034913mS27/PTCD2Family
EC [auth AW]IPR019375Small ribosomal subunit protein bS1mFamily
FC [auth AX]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
FC [auth AX]IPR019368Small ribosomal subunit protein mS29Family
FC [auth AX]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
M [auth BD]IPR001684Large ribosomal subunit protein bL27Family
GC [auth AY]IPR026299Mitochondrial 28S ribosomal protein S31Family
HC [auth AZ]IPR013219Small ribosomal subunit protein mS33Family
IC [auth Aa]IPR000352Peptide chain release factor class IDomain
IC [auth Aa]IPR045853Peptide chain release factor class I superfamilyHomologous Superfamily
IC [auth Aa]IPR005139Peptide chain release factorDomain
JC [auth Ab]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
JC [auth Ab]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
JC [auth Ab]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
JC [auth Ab]IPR001865Small ribosomal subunit protein uS2Family
KC [auth Ac]IPR010625CHCHDomain
KC [auth Ac]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
KC [auth Ac]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
LC [auth Ad]IPR000851Small ribosomal subunit protein uS5Family
LC [auth Ad]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
LC [auth Ad]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
LC [auth Ad]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
LC [auth Ad]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LC [auth Ad]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
LC [auth Ad]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MC [auth Ae]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
MC [auth Ae]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
MC [auth Ae]IPR002885Pentatricopeptide repeatRepeat
NC [auth Ag]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
NC [auth Ag]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NC [auth Ag]IPR000754Small ribosomal subunit protein uS9Family
NC [auth Ag]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
OC [auth Ai]IPR001971Small ribosomal subunit protein uS11Family
OC [auth Ai]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
OC [auth Ai]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
PC [auth Aj]IPR032053Small ribosomal subunit protein mS34Family
N [auth BE]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
N [auth BE]IPR026569Large ribosomal subunit protein bL28Family
N [auth BE]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP52815
O [auth BF]PharosQ9HD33
P [auth BG]PharosQ8TCC3
Q [auth BH]PharosQ9BYC8
R [auth BI]PharosO75394
S [auth BJ]PharosQ9BQ48
T [auth BK]PharosQ9NZE8
U [auth BL]PharosQ5T653
V [auth BM]PharosP09001
W [auth BN]PharosQ9BYD3
X [auth BO]PharosQ9BYD2
Y [auth BP]PharosQ7Z7H8
Z [auth BQ]PharosQ9Y3B7
AA [auth BR]PharosQ9BYD1
BA [auth BS]PharosQ6P1L8
CA [auth BT]PharosQ9P015
DA [auth BU]PharosQ9NX20
EA [auth BV]PharosQ9NRX2
FA [auth BW]PharosQ9H0U6
GA [auth BX]PharosP49406
HA [auth BY]PharosQ9BYC9
JA [auth Ba]PharosQ86TS9
LA [auth Bc]PharosQ6P161
MA [auth Bd]PharosQ7Z7F7
NA [auth Be]PharosQ9BQC6
OA [auth Bf]PharosQ14197
PA [auth Bg]PharosQ8TAE8
QA [auth Bh]PharosQ9NVS2
RA [auth Bi]PharosQ9NP92
SA [auth Bj]PharosQ9BYD6
TA [auth Bl]PharosQ9P0J6
UA [auth Bm]PharosQ9BZE1
WA [auth Bo]PharosQ9NYK5
XA [auth Bp]PharosQ9NQ50
YA [auth Bq]PharosQ8IXM3
ZA [auth Br]PharosQ9Y6G3
AB [auth Bs]PharosQ8N983
BB [auth Bt]PharosQ9H9J2
J [auth BA]PharosQ9NWU5
CB [auth Bu]PharosQ9BRJ2
EB [auth Bw]PharosQ96GC5
FB [auth Bx]PharosQ13405
GB [auth By]PharosQ8N5N7
HB [auth Bz]PharosQ4U2R6
JB [auth AB]PharosP82673
LB [auth AD]PharosQ9NWT8
K [auth BB]PharosQ16540
MB [auth AE]PharosP82932
NB [auth AF]PharosQ9Y2R9
PB [auth AH]PharosP82664
RB [auth AJ]PharosO15235
SB [auth AK]PharosO60783
TB [auth AL]PharosP82914
UB [auth AM]PharosQ9Y3D3
VB [auth AN]PharosQ9Y2R5
L [auth BC]PharosQ96A35
WB [auth AO]PharosQ9Y676
XB [auth AP]PharosQ9Y3D5
YB [auth AQ]PharosP82921
ZB [auth AR]PharosP82650
AC [auth AS]PharosQ9Y3D9
BC [auth AT]PharosP82663
DC [auth AV]PharosQ92552
EC [auth AW]PharosQ9Y2Q9
FC [auth AX]PharosP51398
M [auth BD]PharosQ9P0M9
GC [auth AY]PharosQ92665
HC [auth AZ]PharosQ9Y291
IC [auth Aa]PharosO75570
JC [auth Ab]PharosQ9Y399
KC [auth Ac]PharosQ96BP2
LC [auth Ad]PharosP82675
MC [auth Ae]PharosQ96EY7
NC [auth Ag]PharosP82933
OC [auth Ai]PharosP82912
PC [auth Aj]PharosP82930
N [auth BE]PharosQ13084