Cryo-EM structure of Crt-SPARTA-gRNA-tDNA dimer (conformation-2)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth E] | Cullin_AB | e8it0E1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| A | Cullin_AB | e8it0A1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B, D [auth F] | PF13676 | TIR domain (TIR_2) | TIR domain | This is a family of Toll-like receptors. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| F [auth C], H [auth G] | RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3') | - | - | - |
| E [auth D], G [auth H] | DNA (45-mer) | - | - | - |
| B, D [auth F] | TIR domain-containing protein | - | ||
| A, C [auth E] | Piwi domain-containing protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B, D [auth F] | IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | Domain |
| B, D [auth F] | IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily | Homologous Superfamily |
| A, C [auth E] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
| A, C [auth E] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |
