8IN9 | pdb_00008in9

The structure of the GfsA KSQ-AT didomain in complex with the GfsA ACP domain


Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.47.10 Alpha Beta 3-Layer(aba) Sandwich Peroxisomal Thiolase Chain A, domain 1CATH (utative)
A3.30.70.3290 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (utative)
A3.40.366.10 Alpha Beta 3-Layer(aba) Sandwich Malonyl-Coenzyme A Acyl Carrier Protein domain 2CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
PF02801Beta-ketoacyl synthase, C-terminal domain (Ketoacyl-synt_C)Beta-ketoacyl synthase, C-terminal domainThe structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Domain
PF00109Beta-ketoacyl synthase, N-terminal domain (ketoacyl-synt)Beta-ketoacyl synthase, N-terminal domainThe structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains m ...The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine [1].
Domain
PF16197Ketoacyl-synthetase C-terminal extension (KAsynt_C_assoc)Ketoacyl-synthetase C-terminal extension- Family
PF00698Acyl transferase domain (Acyl_transf_1)Acyl transferase domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Polyketide synthase -
Polyketide synthase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseHomologous Superfamily
IPR014031Beta-ketoacyl synthase, C-terminalDomain
IPR006162Phosphopantetheine attachment sitePTM
IPR049552Polyketide synthase, dehydratase domain, N-terminalDomain
IPR049900Polyketide synthase, dehydratase domainDomain
IPR049551Polyketide synthase, dehydratase domain, C-terminalDomain
IPR016036Malonyl-CoA ACP transacylase, ACP-bindingHomologous Superfamily
IPR050091Polyketide and Nonribosomal Peptide Biosynthesis EnzymesFamily
IPR020841Polyketide synthase, beta-ketoacyl synthase domainDomain
IPR020807Polyketide/metazoan fatty acid synthase-like, dehydratase domainDomain
IPR036736ACP-like superfamilyHomologous Superfamily
IPR014043Acyl transferase domainDomain
IPR041618Polyketide synthase dimerisation element domainDomain
IPR032821Polyketide synthase, C-terminal extensionDomain
IPR009081Phosphopantetheine binding ACP domainDomain
IPR020806Polyketide synthase-like, phosphopantetheine-binding domainDomain
IPR013968Polyketide synthase-like, ketoreductase domainDomain
IPR016039Thiolase-likeHomologous Superfamily
IPR001227Acyl transferase domain superfamilyHomologous Superfamily
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
IPR018201Beta-ketoacyl synthase, active siteActive Site
IPR014030Beta-ketoacyl synthase-like, N-terminalDomain
IPR042104Polyketide synthase, dehydratase domain superfamilyHomologous Superfamily
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseHomologous Superfamily
IPR014031Beta-ketoacyl synthase, C-terminalDomain
IPR006162Phosphopantetheine attachment sitePTM
IPR049552Polyketide synthase, dehydratase domain, N-terminalDomain
IPR049900Polyketide synthase, dehydratase domainDomain
IPR049551Polyketide synthase, dehydratase domain, C-terminalDomain
IPR016036Malonyl-CoA ACP transacylase, ACP-bindingHomologous Superfamily
IPR050091Polyketide and Nonribosomal Peptide Biosynthesis EnzymesFamily
IPR020841Polyketide synthase, beta-ketoacyl synthase domainDomain
IPR020807Polyketide/metazoan fatty acid synthase-like, dehydratase domainDomain
IPR036736ACP-like superfamilyHomologous Superfamily
IPR014043Acyl transferase domainDomain
IPR041618Polyketide synthase dimerisation element domainDomain
IPR032821Polyketide synthase, C-terminal extensionDomain
IPR009081Phosphopantetheine binding ACP domainDomain
IPR020806Polyketide synthase-like, phosphopantetheine-binding domainDomain
IPR013968Polyketide synthase-like, ketoreductase domainDomain
IPR016039Thiolase-likeHomologous Superfamily
IPR001227Acyl transferase domain superfamilyHomologous Superfamily
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
IPR018201Beta-ketoacyl synthase, active siteActive Site
IPR014030Beta-ketoacyl synthase-like, N-terminalDomain
IPR042104Polyketide synthase, dehydratase domain superfamilyHomologous Superfamily