8GJA | pdb_00008gja

RAD51C-XRCC3 structure

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Glyco_hydro_43	e8gjaF1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Glyco_hydro_43	ECOD (v294.1)
D		e8gjaD1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F:	ECOD (v294.1)
B	Glyco_hydro_43	e8gjaB1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Glyco_hydro_43	ECOD (v294.1)
E	Glyco_hydro_43	e8gjaE1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Glyco_hydro_43	ECOD (v294.1)
C	Glyco_hydro_43	e8gjaC1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Glyco_hydro_43	ECOD (v294.1)
A		e8gjaA1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F:	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
D	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
B	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
E	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
C	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
A	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D, F	XRCC3	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA secondary structure binding DNA binding four-way junction DNA binding nucleic acid binding ATP-dependent activity, acting on DNA DNA damage sensor activity molecular sensor activity catalytic activity, acting on DNA ATP-dependent DNA damage sensor activity catalytic activity, acting on a nucleic acid molecular function regulator activity catalytic activity ATP-dependent activity	DNA recombination mitotic recombination resolution of mitotic recombination intermediates primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process resolution of DNA recombination intermediates metabolic process cellular process macromolecule metabolic process telomere organization chromosome organization telomere maintenance DNA recombination mitotic recombination resolution of mitotic recombination intermediates primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process resolution of DNA recombination intermediates metabolic process cellular process macromolecule metabolic process telomere organization chromosome organization telomere maintenance cellular component organization organelle organization telomere maintenance via recombination cellular component organization or biogenesis cellular response to stimulus double-strand break repair response to stimulus double-strand break repair via synthesis-dependent strand annealing cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair formation of extrachromosomal circular DNA cellular component biogenesis cellular component assembly telomere maintenance via telomere trimming t-circle formation	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle replication fork intracellular membraneless organelle chromosome membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex Rad51C-XRCC3 complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle replication fork intracellular membraneless organelle chromosome membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex Rad51C-XRCC3 complex intracellular membrane-bounded organelle DNA recombinase mediator complex
A, C, E	RAD51C	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding endonuclease activity catalytic activity, acting on a nucleic acid hydrolase activity crossover junction DNA endonuclease activity DNA nuclease activity DNA endonuclease activity DNA endonuclease activity, producing 3'-phosphomonoesters hydrolase activity, acting on ester bonds catalytic activity, acting on DNA nuclease activity catalytic activity DNA secondary structure binding DNA binding four-way junction DNA binding nucleic acid binding ATP-dependent activity, acting on DNA DNA damage sensor activity molecular sensor activity ATP-dependent DNA damage sensor activity molecular function regulator activity ATP-dependent activity	cellular response to stimulus sexual reproduction response to stimulus reproductive process meiotic cell cycle process cellular component organization cellular component biogenesis protein-DNA complex organization nucleobase-containing compound metabolic process DNA recombinase assembly cellular component assembly cellular response to stress response to stress protein-containing complex assembly DNA repair complex assembly cellular response to stimulus sexual reproduction response to stimulus reproductive process meiotic cell cycle process cellular component organization cellular component biogenesis protein-DNA complex organization nucleobase-containing compound metabolic process DNA recombinase assembly cellular component assembly cellular response to stress response to stress protein-containing complex assembly DNA repair complex assembly recombinational repair cell cycle cellular component organization or biogenesis double-strand break repair via homologous recombination cell cycle process DNA repair double-strand break repair protein-containing complex organization meiotic cell cycle DNA recombination protein-DNA complex assembly primary metabolic process DNA metabolic process meiotic DNA recombinase assembly double-strand break repair via synthesis-dependent strand annealing nucleic acid metabolic process meiosis I cell cycle process DNA damage response cellular process metabolic process macromolecule metabolic process homologous recombination meiosis I meiotic nuclear division reciprocal homologous recombination organelle fission reciprocal meiotic recombination nuclear division organelle organization	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle replication fork intracellular membraneless organelle chromosome membrane-bounded organelle protein-containing complex nucleus Rad51B-Rad51C-Rad51D-XRCC2 complex nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle replication fork intracellular membraneless organelle chromosome membrane-bounded organelle protein-containing complex nucleus Rad51B-Rad51C-Rad51D-XRCC2 complex nuclear protein-containing complex intracellular membrane-bounded organelle DNA recombinase mediator complex Rad51C-XRCC3 complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D, F	IPR016467	DNA recombination and repair protein, RecA-like	Family
B, D, F	IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	Domain
B, D, F	IPR013632	Rad51-like, C-terminal	Domain
B, D, F	IPR058766	XRCC3/RAD51 homolog 2, helix-hairpin-helix domain	Domain
B, D, F	IPR047348	DNA repair protein XRCC3-like, C-terminal	Domain
B, D, F	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, C, E	IPR016467	DNA recombination and repair protein, RecA-like	Family
A, C, E	IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	Domain
A, C, E	IPR013632	Rad51-like, C-terminal	Domain
A, C, E	IPR052093	Homologous Recombination Repair Mediator	Family
A, C, E	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.