8FVI | pdb_00008fvi

Human APOBEC3H bound to HIV-1 Vif in complex with CBF-beta, ELOB, ELOC, and CUL5


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 0]SCOP2B SuperfamilyCore binding factor beta, CBF 8042548 3001169 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyCytidine deaminase-like 8087262 3001838 SCOP2B (2022-06-29)
G [auth y]SCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F [auth x]1.20.1310.10 Mainly Alpha Up-down Bundle 5 helical Cullin repeat like Cullin RepeatsCATH (utative)
H [auth z]3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1 Chain ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A]PF18771APOBEC3 (APOBEC3)APOBEC3- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]Core-binding factor subunit beta
B [auth 1]Virion infectivity factor
C [auth A]DNA dC->dU-editing enzyme APOBEC-3H
D [auth B]RNA(5'-R(AP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')---
E [auth C]RNA(5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')---
F [auth x]Cullin 5
G [auth y]Elongin-B
H [auth z]Elongin-C

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth 0]PharosQ13951
C [auth A]PharosQ6NTF7
F [auth x]PharosQ93034
G [auth y]PharosQ15370
H [auth z]PharosQ15369