Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyYidC transmembrane domain-like8101852 3002720 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyEMC6/GET2-like8101858 3002721 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
JF_UNCLASSIFIEDe8eoiJ2 A: beta barrelsX: SH3H: SH3T: SH3F: F_UNCLASSIFIEDECOD (1.6)
JPF00625e8eoiJ1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00625ECOD (1.6)
BPF22890e8eoiB1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF22890ECOD (1.6)
F [auth G]PF09430e8eoiG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Prealbumin-likeF: PF09430ECOD (1.6)
G [auth H]PF03665e8eoiH1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: PF03665ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07774ER membrane protein complex subunit 1, C-terminal (EMC1_C)ER membrane protein complex subunit 1, C-terminalThis is the C-terminal domain of ER membrane protein complex subunit 1. ER membrane protein complex subunit 1 is a component of the ER membrane protein complex (EMC, composed of EMC1, EMC2, EMC3, EMC4, EMC5 and EMC6). In Saccharomyces cerevisiae, the ...This is the C-terminal domain of ER membrane protein complex subunit 1. ER membrane protein complex subunit 1 is a component of the ER membrane protein complex (EMC, composed of EMC1, EMC2, EMC3, EMC4, EMC5 and EMC6). In Saccharomyces cerevisiae, the EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER) [1].
Domain
PF13360PQQ-like domain (PQQ_2)PQQ-like domain- Repeat
PF00625Guanylate kinase (Guanylate_kin)Guanylate kinase- Domain
PF12052Voltage gated calcium channel subunit beta domain 4Aa N terminal (VGCC_beta4Aa_N)Voltage gated calcium channel subunit beta domain 4Aa N terminalThe beta subunit of voltage gated calcium channels is coded for by four genes 1-4. Gene 4 can produce two types of beta4A domain (beta4Aa and beta4Ab) according to how the gene splicing is carried out. This family is part of the beta4Aa N terminal do ...The beta subunit of voltage gated calcium channels is coded for by four genes 1-4. Gene 4 can produce two types of beta4A domain (beta4Aa and beta4Ab) according to how the gene splicing is carried out. This family is part of the beta4Aa N terminal domain. It is made up of an alpha helix and a beta strand. It is thought to regulate the channel properties through protein-protein interactions with non Ca channel proteins. [1]
Domain
PF14559Tetratricopeptide repeat (TPR_19)Tetratricopeptide repeat- Repeat
PF01956Integral membrane protein EMC3/TMCO1-like (EMC3_TMCO1)Integral membrane protein EMC3/TMCO1-like- Family
D [auth E]PF10270Membrane magnesium transporter (MMgT)Membrane magnesium transporter- Family
E [auth F]PF07019EMC6 (EMC6)EMC6- Family
F [auth G]PF09430ER membrane protein complex subunit 7, beta-sandwich domain (EMC7_beta-sandw)ER membrane protein complex subunit 7, beta-sandwich domainThis is the beta-sandwich domain found in ER membrane protein complex subunit 7 (EMC7) [1,2], which is an integral membrane component of the EMC. EMC is widely conserved and involved in membrane protein biogenesis. It mediates the insertion into endo ...This is the beta-sandwich domain found in ER membrane protein complex subunit 7 (EMC7) [1,2], which is an integral membrane component of the EMC. EMC is widely conserved and involved in membrane protein biogenesis. It mediates the insertion into endoplasmic reticulum membranes of newly synthesized membrane proteins in an energy-independent manner, both post-translational insertions of tail-anchored proteins and co-translational insertion of multipass membrane proteins [3,4]. This entry includes UPF0620 protein C83.10 from S. pombe, an orthologue of animal EMC7. This domain is also found in nodal modulators, which have been identified as part of a protein complex that participates in the nodal signalling pathway during vertebrate development [5].
Domain
G [auth H]PF03665Uncharacterised protein family (UPF0172) (UPF0172)Uncharacterised protein family (UPF0172)- Family
H [auth I]PF21203ER membrane protein complex subunit 10 (ECM10)ER membrane protein complex subunit 10- Family
I [auth K]PF16905Voltage-dependent L-type calcium channel, IQ-associated (GPHH)Voltage-dependent L-type calcium channel, IQ-associated- Family
I [auth K]PF08763Voltage gated calcium channel IQ domain (Ca_chan_IQ)Voltage gated calcium channel IQ domainVoltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin [1]. ...Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin [1]. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Domain
I [auth K]PF00520Ion transport protein (Ion_trans)Ion transport protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
ER membrane protein complex subunit 1-
Voltage-dependent L-type calcium channel subunit beta-3
K [auth D]ER membrane protein complex subunit 4-
ER membrane protein complex subunit 2-
ER membrane protein complex subunit 3-
D [auth E]ER membrane protein complex subunit 5
E [auth F]ER membrane protein complex subunit 6-
F [auth G]ER membrane protein complex subunit 7
G [auth H]ER membrane protein complex subunit 8-
H [auth I]ER membrane protein complex subunit 10-
I [auth K]Voltage-dependent L-type calcium channel subunit alpha-1C

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilyHomologous Superfamily
IPR011678ER membrane protein complex subunit 1, C-terminalDomain
IPR002372Pyrrolo-quinoline quinone repeatRepeat
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR026895ER membrane protein complex subunit 1Family
IPR008145Guanylate kinase/L-type calcium channel beta subunitDomain
IPR001452SH3 domainDomain
IPR036028SH3-like domain superfamilyHomologous Superfamily
IPR035760Voltage-dependent L-type calcium channel subunit beta-3, SH3 domainDomain
IPR046937Voltage-dependent L-type calcium channel subunit beta-1-4, N-terminal A domainDomain
IPR008079Voltage-dependent calcium channel, L-type, beta-3 subunitFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000584Voltage-dependent calcium channel, L-type, beta subunitFamily
K [auth D]IPR009445TMEM85/ER membrane protein complex subunit 4Family
IPR039856ER membrane protein complex subunit 2-likeFamily
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
IPR019734Tetratricopeptide repeatRepeat
IPR008568ER membrane protein complex subunit 3Family
IPR002809Integral membrane protein EMC3/TMCO1-likeFamily
D [auth E]IPR018937Membrane magnesium transporterFamily
E [auth F]IPR008504ER membrane protein complex subunit 6Family
E [auth F]IPR029008ER membrane protein complex subunit 6-likeFamily
F [auth G]IPR013784Carbohydrate-binding-like foldHomologous Superfamily
F [auth G]IPR019008ER membrane protein complex subunit 7, beta-sandwich domainDomain
F [auth G]IPR039163ER membrane protein complex subunit 7Family
G [auth H]IPR037518MPN domainDomain
G [auth H]IPR005366ER membrane protein complex subunit 8/9Family
I [auth K]IPR014873Voltage-dependent calcium channel, alpha-1 subunit, IQ domainDomain
I [auth K]IPR002077Voltage-dependent calcium channel, alpha-1 subunitFamily
I [auth K]IPR031649Voltage-dependent L-type calcium channel, IQ-associated domainDomain
I [auth K]IPR005451Voltage-dependent calcium channel, L-type, alpha-1C subunitFamily
I [auth K]IPR005821Ion transport domainDomain
I [auth K]IPR005446Voltage-dependent calcium channel, L-type, alpha-1 subunitFamily
I [auth K]IPR031688Voltage-gated calcium channel subunit alpha, C-terminalDomain
I [auth K]IPR027359Voltage-dependent channel domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosQ8N766
K [auth D]PharosQ5J8M3
PharosQ15006
PharosQ9P0I2
D [auth E]PharosQ8N4V1
E [auth F]PharosQ9BV81
F [auth G]PharosQ9NPA0
G [auth H]PharosO43402
H [auth I]PharosQ5UCC4
I [auth K]PharosQ13936