Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth S021] | Ald_Xan_dh_C | e7ztaS0211 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| C [auth S031] | Ald_Xan_dh_C | e7ztaS0311 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| D [auth S041] | Ald_Xan_dh_C | e7ztaS0411 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| E [auth S051] | Ald_Xan_dh_C | e7ztaS0511 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| F [auth S061] | Ald_Xan_dh_C | e7ztaS0611 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| G [auth S071] | Ald_Xan_dh_C | e7ztaS0711 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| H [auth S081] | Ald_Xan_dh_C | e7ztaS0811 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| I [auth S091] | Ald_Xan_dh_C | e7ztaS0911 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| J [auth S101] | Ald_Xan_dh_C | e7ztaS1011 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| K [auth S111] | Ald_Xan_dh_C | e7ztaS1111 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| L [auth S121] | Ald_Xan_dh_C | e7ztaS1211 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| M [auth S131] | Ald_Xan_dh_C | e7ztaS1311 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| O [auth S151] | Ald_Xan_dh_C | e7ztaS1511 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| Q [auth S171] | Ald_Xan_dh_C | e7ztaS1711 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| R [auth S181] | Ald_Xan_dh_C | e7ztaS1811 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| S [auth S191] | Ald_Xan_dh_C | e7ztaS1911 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| T [auth S201] | Ald_Xan_dh_C | e7ztaS2011 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| U [auth S211] | Ald_Xan_dh_C | e7ztaS2111 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| X [auth L021] | Ald_Xan_dh_C | e7ztaL0211 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| Y [auth L031] | Ald_Xan_dh_C | e7ztaL0311 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| Z [auth L041] | Ald_Xan_dh_C | e7ztaL0411 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| AA [auth L051] | Ald_Xan_dh_C | e7ztaL0511 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| BA [auth L061] | Ald_Xan_dh_C | e7ztaL0611 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| CA [auth L091] | Ald_Xan_dh_C | e7ztaL0911 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| DA [auth L131] | Ald_Xan_dh_C | e7ztaL1311 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| EA [auth L141] | Ald_Xan_dh_C | e7ztaL1411 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| IA [auth L181] | Ald_Xan_dh_C | e7ztaL1811 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| JA [auth L191] | Ald_Xan_dh_C | e7ztaL1911 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| KA [auth L201] | Ald_Xan_dh_C | e7ztaL2011 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| LA [auth L211] | Ald_Xan_dh_C | e7ztaL2111 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| MA [auth L221] | Ald_Xan_dh_C | e7ztaL2211 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| NA [auth L231] | Ald_Xan_dh_C | e7ztaL2311 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| OA [auth L241] | Ald_Xan_dh_C | e7ztaL2411 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| QA [auth L271] | Ald_Xan_dh_C | e7ztaL2711 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| TA [auth L301] | Ald_Xan_dh_C | e7ztaL3011 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| VA [auth L321] | Ald_Xan_dh_C | e7ztaL3211 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| WA [auth L331] | Ald_Xan_dh_C | e7ztaL3311 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| XA [auth L341] | Ald_Xan_dh_C | e7ztaL3411 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| YA [auth L351] | Ald_Xan_dh_C | e7ztaL3511 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| ZA [auth L361] | Ald_Xan_dh_C | e7ztaL3611 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| UA [auth L311] | Ald_Xan_dh_C | e7ztaL3111 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| SA [auth L291] | Ald_Xan_dh_C | e7ztaL2911 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| RA [auth L281] | Ald_Xan_dh_C | e7ztaL2811 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| PA [auth L251] | Ald_Xan_dh_C | e7ztaL2511 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| HA [auth L171] | Ald_Xan_dh_C | e7ztaL1711 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| GA [auth L161] | Ald_Xan_dh_C | e7ztaL1611 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| FA [auth L151] | Ald_Xan_dh_C | e7ztaL1511 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| P [auth S161] | Ald_Xan_dh_C | e7ztaS1611 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
| N [auth S141] | Ald_Xan_dh_C | e7ztaS1411 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ald_Xan_dh_C | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| A [auth 16S1] | 2MG | Parent Component: G |
| A [auth 16S1] | 4OC | Parent Component: C |
| A [auth 16S1] | 5MC | Parent Component: C |
| A [auth 16S1] | G7M | Parent Component: G |
| A [auth 16S1] | MA6 | Parent Component: A |
| A [auth 16S1] | PSU | Parent Component: U |
| A [auth 16S1] | UR3 | Parent Component: U |
| L [auth S121] | D2T | Parent Component: ASP |
| Y [auth L031] | MEQ | Parent Component: GLN :  AA0071 :  N5-methyl-L-glutamine MOD:00080 |
| AB [auth ATR1] | 4SU | Parent Component: U :  AA0071 |
| AB [auth ATR1] | 5MU | Parent Component: U :  AA0071 |
| AB [auth ATR1] | MIA | Parent Component: A :  AA0071 |
| AB [auth ATR1] | PSU | Parent Component: U :  AA0071 |
| BB [auth PTR1] | 5MU | Parent Component: U :  AA0071 |
| BB [auth PTR1] | G7M | Parent Component: G :  AA0071 |
| BB [auth PTR1] | H2U | Parent Component: U :  AA0071 |
| BB [auth PTR1] | PSU | Parent Component: U :  AA0071 |
| BB [auth PTR1] | T6A | Parent Component: A :  AA0071 |
| BB [auth PTR1] | U8U | Parent Component: U :  AA0071 |
| DB [auth ETR1] | 2MA | Parent Component: A :  AA0071 |
| DB [auth ETR1] | 4SU | Parent Component: U :  AA0071 |
| DB [auth ETR1] | 5MU | Parent Component: U :  AA0071 |
| DB [auth ETR1] | H2U | Parent Component: U :  AA0071 |
| DB [auth ETR1] | OMG | Parent Component: G :  AA0071 |
| DB [auth ETR1] | OMU | Parent Component: U :  AA0071 |
| DB [auth ETR1] | PSU | Parent Component: U :  AA0071 |
| GA [auth L161] | 4D4 | Parent Component: ARG :  AA0071 |
| V [auth 23S1] | 1MG | Parent Component: G :  AA0071 |
| V [auth 23S1] | 2MA | Parent Component: A :  AA0071 |
| V [auth 23S1] | 2MG | Parent Component: G :  AA0071 |
| V [auth 23S1] | 3TD | Parent Component: U :  AA0071 |
| V [auth 23S1] | 5MC | Parent Component: C :  AA0071 |
| V [auth 23S1] | 5MU | Parent Component: U :  AA0071 |
| V [auth 23S1] | 6MZ | Parent Component: A :  AA0071 |
| V [auth 23S1] | G7M | Parent Component: G :  AA0071 |
| V [auth 23S1] | H2U | Parent Component: U :  AA0071 |
| V [auth 23S1] | OMC | Parent Component: C :  AA0071 |
| V [auth 23S1] | OMG | Parent Component: G :  AA0071 |
| V [auth 23S1] | OMU | Parent Component: U :  AA0071 |
| V [auth 23S1] | PSU | Parent Component: U :  AA0071 |