D. melanogaster 13-protofilament microtubule
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| ZA [auth 7B] | Ribosomal_L30 | e7qup7B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| X [auth 1D] | Ribosomal_L30 | e7qup1D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| WA [auth 6D] | Ribosomal_L30 | e7qup6D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| V [auth 1B] | Ribosomal_L30 | e7qup1B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| UA [auth 6B] | Ribosomal_L30 | e7qup6B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| S [auth 13D] | Ribosomal_L30 | e7qup13D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| RA [auth 5D] | Ribosomal_L30 | e7qup5D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| Q [auth 13B] | Ribosomal_L30 | e7qup13B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| PA [auth 5B] | Ribosomal_L30 | e7qup5B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| N [auth 12D] | Ribosomal_L30 | e7qup12D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| MA [auth 4D] | Ribosomal_L30 | e7qup4D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| LB [auth 9D] | Ribosomal_L30 | e7qup9D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| L [auth 12B] | Ribosomal_L30 | e7qup12B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| KA [auth 4B] | Ribosomal_L30 | e7qup4B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| JB [auth 9B] | Ribosomal_L30 | e7qup9B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| I [auth 11D] | Ribosomal_L30 | e7qup11D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| HA [auth 3D] | Ribosomal_L30 | e7qup3D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| GB [auth 8D] | Ribosomal_L30 | e7qup8D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| G [auth 11B] | Ribosomal_L30 | e7qup11B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| FA [auth 3B] | Ribosomal_L30 | e7qup3B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| EB [auth 8B] | Ribosomal_L30 | e7qup8B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| D [auth 10D] | Ribosomal_L30 | e7qup10D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| CA [auth 2D] | Ribosomal_L30 | e7qup2D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| BB [auth 7D] | Ribosomal_L30 | e7qup7D1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| B [auth 10B] | Ribosomal_L30 | e7qup10B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| AA [auth 2B] | Ribosomal_L30 | e7qup2B1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| Z [auth 2A] | Ribosomal_L30 | e7qup2A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| YA [auth 7A] | Ribosomal_L30 | e7qup7A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| Y [auth 1E] | Ribosomal_L30 | e7qup1E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| XA [auth 6E] | Ribosomal_L30 | e7qup6E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| W [auth 1C] | Ribosomal_L30 | e7qup1C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| VA [auth 6C] | Ribosomal_L30 | e7qup6C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| U [auth 1A] | Ribosomal_L30 | e7qup1A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| TA [auth 6A] | Ribosomal_L30 | e7qup6A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| T [auth 13E] | Ribosomal_L30 | e7qup13E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| SA [auth 5E] | Ribosomal_L30 | e7qup5E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| R [auth 13C] | Ribosomal_L30 | e7qup13C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| QA [auth 5C] | Ribosomal_L30 | e7qup5C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| P [auth 13A] | Ribosomal_L30 | e7qup13A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| OA [auth 5A] | Ribosomal_L30 | e7qup5A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| O [auth 12E] | Ribosomal_L30 | e7qup12E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| NA [auth 4E] | Ribosomal_L30 | e7qup4E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| MB [auth 9E] | Ribosomal_L30 | e7qup9E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| M [auth 12C] | Ribosomal_L30 | e7qup12C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| LA [auth 4C] | Ribosomal_L30 | e7qup4C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| KB [auth 9C] | Ribosomal_L30 | e7qup9C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| K [auth 12A] | Ribosomal_L30 | e7qup12A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| JA [auth 4A] | Ribosomal_L30 | e7qup4A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| J [auth 11E] | Ribosomal_L30 | e7qup11E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| IB [auth 9A] | Ribosomal_L30 | e7qup9A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| IA [auth 3E] | Ribosomal_L30 | e7qup3E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| HB [auth 8E] | Ribosomal_L30 | e7qup8E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| H [auth 11C] | Ribosomal_L30 | e7qup11C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| GA [auth 3C] | Ribosomal_L30 | e7qup3C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| FB [auth 8C] | Ribosomal_L30 | e7qup8C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| F [auth 11A] | Ribosomal_L30 | e7qup11A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| EA [auth 3A] | Ribosomal_L30 | e7qup3A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| E [auth 10E] | Ribosomal_L30 | e7qup10E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| DB [auth 8A] | Ribosomal_L30 | e7qup8A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| DA [auth 2E] | Ribosomal_L30 | e7qup2E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| CB [auth 7E] | Ribosomal_L30 | e7qup7E1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| C [auth 10C] | Ribosomal_L30 | e7qup10C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| BA [auth 2C] | Ribosomal_L30 | e7qup2C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| AB [auth 7C] | Ribosomal_L30 | e7qup7C1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
| A [auth 10A] | Ribosomal_L30 | e7qup10A1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_L30 | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00091 | Tubulin/FtsZ family, GTPase domain (Tubulin) | Tubulin/FtsZ family, GTPase domain | This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ... | Domain | |
| PF03953 | Tubulin C-terminal domain (Tubulin_C) | Tubulin C-terminal domain | This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ... | Domain | |
| PF00091 | Tubulin/FtsZ family, GTPase domain (Tubulin) | Tubulin/FtsZ family, GTPase domain | This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ... | Domain | |
| PF03953 | Tubulin C-terminal domain (Tubulin_C) | Tubulin C-terminal domain | This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR003008 | Tubulin/FtsZ, GTPase domain | Domain | |
| IPR008280 | Tubulin/FtsZ, C-terminal | Homologous Superfamily | |
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain | Homologous Superfamily | |
| IPR017975 | Tubulin, conserved site | Conserved Site | |
| IPR000217 | Tubulin | Family | |
| IPR023123 | Tubulin, C-terminal | Homologous Superfamily | |
| IPR002453 | Beta tubulin | Family | |
| IPR013838 | Beta tubulin, autoregulation binding site | Binding Site | |
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain | Domain | |
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily | Homologous Superfamily | |
| IPR003008 | Tubulin/FtsZ, GTPase domain | Domain | |
| IPR008280 | Tubulin/FtsZ, C-terminal | Homologous Superfamily | |
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain | Homologous Superfamily | |
| IPR017975 | Tubulin, conserved site | Conserved Site | |
| IPR002452 | Alpha tubulin | Family | |
| IPR000217 | Tubulin | Family | |
| IPR023123 | Tubulin, C-terminal | Homologous Superfamily | |
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain | Domain | |
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily | Homologous Superfamily |














