7QUP | pdb_00007qup

D. melanogaster 13-protofilament microtubule


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AA [auth 2B]Ribosomal_L30e7qup2B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
B [auth 10B]Ribosomal_L30e7qup10B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
BB [auth 7D]Ribosomal_L30e7qup7D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
D [auth 10D]Ribosomal_L30e7qup10D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
EB [auth 8B]Ribosomal_L30e7qup8B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
FA [auth 3B]Ribosomal_L30e7qup3B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
G [auth 11B]Ribosomal_L30e7qup11B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
HA [auth 3D]Ribosomal_L30e7qup3D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
JB [auth 9B]Ribosomal_L30e7qup9B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
L [auth 12B]Ribosomal_L30e7qup12B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
LB [auth 9D]Ribosomal_L30e7qup9D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
MA [auth 4D]Ribosomal_L30e7qup4D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
PA [auth 5B]Ribosomal_L30e7qup5B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
Q [auth 13B]Ribosomal_L30e7qup13B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
RA [auth 5D]Ribosomal_L30e7qup5D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
S [auth 13D]Ribosomal_L30e7qup13D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
UA [auth 6B]Ribosomal_L30e7qup6B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
V [auth 1B]Ribosomal_L30e7qup1B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
WA [auth 6D]Ribosomal_L30e7qup6D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
X [auth 1D]Ribosomal_L30e7qup1D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
ZA [auth 7B]Ribosomal_L30e7qup7B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
N [auth 12D]Ribosomal_L30e7qup12D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
KA [auth 4B]Ribosomal_L30e7qup4B1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
I [auth 11D]Ribosomal_L30e7qup11D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
GB [auth 8D]Ribosomal_L30e7qup8D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
CA [auth 2D]Ribosomal_L30e7qup2D1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
A [auth 10A]Ribosomal_L30e7qup10A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
AB [auth 7C]Ribosomal_L30e7qup7C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
BA [auth 2C]Ribosomal_L30e7qup2C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
CB [auth 7E]Ribosomal_L30e7qup7E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
DA [auth 2E]Ribosomal_L30e7qup2E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
DB [auth 8A]Ribosomal_L30e7qup8A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
E [auth 10E]Ribosomal_L30e7qup10E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
EA [auth 3A]Ribosomal_L30e7qup3A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
FB [auth 8C]Ribosomal_L30e7qup8C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
H [auth 11C]Ribosomal_L30e7qup11C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
HB [auth 8E]Ribosomal_L30e7qup8E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
IA [auth 3E]Ribosomal_L30e7qup3E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
IB [auth 9A]Ribosomal_L30e7qup9A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
J [auth 11E]Ribosomal_L30e7qup11E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
JA [auth 4A]Ribosomal_L30e7qup4A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
K [auth 12A]Ribosomal_L30e7qup12A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
LA [auth 4C]Ribosomal_L30e7qup4C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
M [auth 12C]Ribosomal_L30e7qup12C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
MB [auth 9E]Ribosomal_L30e7qup9E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
NA [auth 4E]Ribosomal_L30e7qup4E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
O [auth 12E]Ribosomal_L30e7qup12E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
OA [auth 5A]Ribosomal_L30e7qup5A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
P [auth 13A]Ribosomal_L30e7qup13A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
QA [auth 5C]Ribosomal_L30e7qup5C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
T [auth 13E]Ribosomal_L30e7qup13E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
TA [auth 6A]Ribosomal_L30e7qup6A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
U [auth 1A]Ribosomal_L30e7qup1A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
VA [auth 6C]Ribosomal_L30e7qup6C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
W [auth 1C]Ribosomal_L30e7qup1C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
XA [auth 6E]Ribosomal_L30e7qup6E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
YA [auth 7A]Ribosomal_L30e7qup7A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
Z [auth 2A]Ribosomal_L30e7qup2A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
Y [auth 1E]Ribosomal_L30e7qup1E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
SA [auth 5E]Ribosomal_L30e7qup5E1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
R [auth 13C]Ribosomal_L30e7qup13C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
KB [auth 9C]Ribosomal_L30e7qup9C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
GA [auth 3C]Ribosomal_L30e7qup3C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
F [auth 11A]Ribosomal_L30e7qup11A1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
C [auth 10C]Ribosomal_L30e7qup10C1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Tubulin beta-1 chain
Tubulin alpha-1 chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily