7QUP | pdb_00007qup

D. melanogaster 13-protofilament microtubule


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZA [auth 7B]Ribosomal_L30e7qup7B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
X [auth 1D]Ribosomal_L30e7qup1D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
WA [auth 6D]Ribosomal_L30e7qup6D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
V [auth 1B]Ribosomal_L30e7qup1B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
UA [auth 6B]Ribosomal_L30e7qup6B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
S [auth 13D]Ribosomal_L30e7qup13D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
RA [auth 5D]Ribosomal_L30e7qup5D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
Q [auth 13B]Ribosomal_L30e7qup13B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
PA [auth 5B]Ribosomal_L30e7qup5B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
N [auth 12D]Ribosomal_L30e7qup12D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
MA [auth 4D]Ribosomal_L30e7qup4D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
LB [auth 9D]Ribosomal_L30e7qup9D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
L [auth 12B]Ribosomal_L30e7qup12B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
KA [auth 4B]Ribosomal_L30e7qup4B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
JB [auth 9B]Ribosomal_L30e7qup9B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
I [auth 11D]Ribosomal_L30e7qup11D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
HA [auth 3D]Ribosomal_L30e7qup3D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
GB [auth 8D]Ribosomal_L30e7qup8D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
G [auth 11B]Ribosomal_L30e7qup11B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
FA [auth 3B]Ribosomal_L30e7qup3B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
EB [auth 8B]Ribosomal_L30e7qup8B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
D [auth 10D]Ribosomal_L30e7qup10D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
CA [auth 2D]Ribosomal_L30e7qup2D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
BB [auth 7D]Ribosomal_L30e7qup7D1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
B [auth 10B]Ribosomal_L30e7qup10B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
AA [auth 2B]Ribosomal_L30e7qup2B1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
Z [auth 2A]Ribosomal_L30e7qup2A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
YA [auth 7A]Ribosomal_L30e7qup7A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
Y [auth 1E]Ribosomal_L30e7qup1E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
XA [auth 6E]Ribosomal_L30e7qup6E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
W [auth 1C]Ribosomal_L30e7qup1C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
VA [auth 6C]Ribosomal_L30e7qup6C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
U [auth 1A]Ribosomal_L30e7qup1A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
TA [auth 6A]Ribosomal_L30e7qup6A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
T [auth 13E]Ribosomal_L30e7qup13E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
SA [auth 5E]Ribosomal_L30e7qup5E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
R [auth 13C]Ribosomal_L30e7qup13C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
QA [auth 5C]Ribosomal_L30e7qup5C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
P [auth 13A]Ribosomal_L30e7qup13A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
OA [auth 5A]Ribosomal_L30e7qup5A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
O [auth 12E]Ribosomal_L30e7qup12E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
NA [auth 4E]Ribosomal_L30e7qup4E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
MB [auth 9E]Ribosomal_L30e7qup9E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
M [auth 12C]Ribosomal_L30e7qup12C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
LA [auth 4C]Ribosomal_L30e7qup4C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
KB [auth 9C]Ribosomal_L30e7qup9C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
K [auth 12A]Ribosomal_L30e7qup12A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
JA [auth 4A]Ribosomal_L30e7qup4A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
J [auth 11E]Ribosomal_L30e7qup11E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
IB [auth 9A]Ribosomal_L30e7qup9A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
IA [auth 3E]Ribosomal_L30e7qup3E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
HB [auth 8E]Ribosomal_L30e7qup8E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
H [auth 11C]Ribosomal_L30e7qup11C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
GA [auth 3C]Ribosomal_L30e7qup3C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
FB [auth 8C]Ribosomal_L30e7qup8C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
F [auth 11A]Ribosomal_L30e7qup11A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
EA [auth 3A]Ribosomal_L30e7qup3A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
E [auth 10E]Ribosomal_L30e7qup10E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
DB [auth 8A]Ribosomal_L30e7qup8A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
DA [auth 2E]Ribosomal_L30e7qup2E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
CB [auth 7E]Ribosomal_L30e7qup7E1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
C [auth 10C]Ribosomal_L30e7qup10C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
BA [auth 2C]Ribosomal_L30e7qup2C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
AB [auth 7C]Ribosomal_L30e7qup7C1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)
A [auth 10A]Ribosomal_L30e7qup10A1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Tubulin beta-1 chain
Tubulin alpha-1 chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily