7ZQ9 | pdb_00007zq9

Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8094723 3000824 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8094180 3000813 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyElectron transport accessory proteins 8094773 3000325 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPhotosystem I subunit PsaD 8095071 3000951 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins 8093860 3000020 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8094499 3000850 SCOP2B (2022-06-29)
X [auth 92]SCOP2B SuperfamilyChlorophyll a-b binding protein 8097194 3000343 SCOP2B (2022-06-29)
T [auth 9]SCOP2B SuperfamilyChlorophyll a-b binding protein 8097194 3000343 SCOP2B (2022-06-29)
S [auth 6]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099928 3000343 SCOP2B (2022-06-29)
R [auth 5]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099932 3000343 SCOP2B (2022-06-29)
Q [auth 4]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099934 3000343 SCOP2B (2022-06-29)
O [auth 8]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099930 3000343 SCOP2B (2022-06-29)
N [auth 7]SCOP2B SuperfamilyChlorophyll a-b binding protein 8100068 3000343 SCOP2B (2022-06-29)
P [auth Z]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099102 3000343 SCOP2B (2022-06-29)
L [auth 1]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099102 3000343 SCOP2B (2022-06-29)
J [auth L]SCOP2B SuperfamilyPhotosystem I reaction center subunit XI, PsaL 8097190 3000870 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8094461 3000850 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth J]e7zq9J1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
V [auth I2]e7zq9I21 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
H [auth I]e7zq9I1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
Ge7zq9G1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
Fe7zq9F1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
Ee7zq9E1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
De7zq9D1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
Ce7zq9C1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
U [auth B2]WD40, ANAPC4_WD40, WD40_CDC20-Fze7zq9B201 A: a/b three-layered sandwichesX: Rossmann-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: WD40, ANAPC4_WD40, WD40_CDC20-FzECOD (v294.1)
Be7zq9B1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
X [auth 92]e7zq9921 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
T [auth 9]e7zq991 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
S [auth 6]e7zq961 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
R [auth 5]e7zq951 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
Q [auth 4]e7zq941 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
O [auth 8]e7zq981 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
N [auth 7]e7zq971 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
M [auth 3]e7zq931 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
P [auth Z]e7zq9Z1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
L [auth 1]e7zq911 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
Ke7zq9K1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
W [auth L2]e7zq9L21 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
J [auth L]e7zq9L1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
Ae7zq9A1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth J]PF01701Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ)Photosystem I reaction centre subunit IX / PsaJ- Family
H [auth I],
V [auth I2]
PF00796Photosystem I reaction centre subunit VIII (PSI_8)Photosystem I reaction centre subunit VIII- Family
PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
T [auth 9],
X [auth 92]
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
S [auth 6]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
R [auth 5]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
Q [auth 4]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
O [auth 8]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
N [auth 7]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
L [auth 1],
P [auth Z]
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth J]Photosystem I reaction center subunit IX-
H [auth I],
V [auth I2]
Photosystem I reaction center subunit VIII-
Photosystem I reaction center subunit V, chloroplastic-
Photosystem I reaction center subunit III, chloroplastic-
Photosystem I reaction center subunit IV, chloroplastic-
Photosystem I reaction center subunit II, chloroplastic-
Photosystem I iron-sulfur center
U [auth B2]Photosystem I P700 chlorophyll a apoprotein A2---
Photosystem I P700 chlorophyll a apoprotein A2
T [auth 9],
X [auth 92]
Chlorophyll a-b binding protein, chloroplastic
S [auth 6]Chlorophyll a-b binding protein, chloroplastic
R [auth 5]Chlorophyll a-b binding protein, chloroplastic
Q [auth 4]Chlorophyll a-b binding protein, chloroplastic (Lhca4)
O [auth 8]Chlorophyll a-b binding protein, chloroplastic
N [auth 7]Chlorophyll a-b binding protein, chloroplastic
M [auth 3]Chlorophyll a-b binding protein, chloroplastic---
L [auth 1],
P [auth Z]
Chlorophyll a-b binding protein, chloroplastic
Photosystem I reaction center subunit psaK, chloroplastic-
J [auth L],
W [auth L2]
PSI subunit V-
Photosystem I P700 chlorophyll a apoprotein A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth J]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
I [auth J]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
H [auth I],
V [auth I2]
IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
H [auth I],
V [auth I2]
IPR001302Photosystem I reaction centre subunit VIIIFamily
IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
IPR017494Photosystem I reaction center subunit VFamily
IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
IPR000549Photosystem I reaction center subunit V/PsaKFamily
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
IPR003685Photosystem I PsaDFamily
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR050157Photosystem I iron-sulfur centerFamily
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR017491Photosystem I protein PsaCFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR006244Photosystem I PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
T [auth 9],
X [auth 92]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
T [auth 9],
X [auth 92]
IPR022796Chlorophyll A-B binding proteinFamily
S [auth 6]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
S [auth 6]IPR022796Chlorophyll A-B binding proteinFamily
R [auth 5]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
R [auth 5]IPR022796Chlorophyll A-B binding proteinFamily
Q [auth 4]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
Q [auth 4]IPR022796Chlorophyll A-B binding proteinFamily
O [auth 8]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
O [auth 8]IPR022796Chlorophyll A-B binding proteinFamily
N [auth 7]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
N [auth 7]IPR022796Chlorophyll A-B binding proteinFamily
L [auth 1],
P [auth Z]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
L [auth 1],
P [auth Z]
IPR022796Chlorophyll A-B binding proteinFamily
IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
IPR000549Photosystem I reaction center subunit V/PsaKFamily
IPR017493Photosystem I reaction center subunit psaK, plantFamily
J [auth L],
W [auth L2]
IPR003757Photosystem I PsaL, reaction centre subunit XIDomain
J [auth L],
W [auth L2]
IPR022980Photosystem I, reaction centre subunit XIFamily
J [auth L],
W [auth L2]
IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyHomologous Superfamily
IPR006243Photosystem I PsaAFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site