7YMM | pdb_00007ymm

PSII-Pcb Tetramer of Acaryochloris Marina

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 1A],
IB [auth 4A],
OA [auth 3A],
U [auth 2A]		PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
C [auth 1C],
KB [auth 4C],
QA [auth 3C],
W [auth 2C]		PF00421Photosystem II protein (PSII)Photosystem II protein- Family
D [auth 1D],
LB [auth 4D],
RA [auth 3D],
X [auth 2D]		PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
E [auth 1E],
MB [auth 4E],
SA [auth 3E],
Y [auth 2E]		PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
AA [auth 2H],
G [auth 1H],
OB [auth 4H],
UA [auth 3H]		PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
BA [auth 2I],
H [auth 1I],
PB [auth 4I],
VA [auth 3I]		PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family
FA [auth 2T],
L [auth 1T],
TB [auth 4T],
ZA [auth 3T]		PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T proteinThe exact function of this protein is unknown. It probably consists of a single transmembrane spanning helix. The Swiss:P37256 protein, appears to be (i) a novel photosystem II subunit and (ii) required for maintaining optimal photosystem II activity ...The exact function of this protein is unknown. It probably consists of a single transmembrane spanning helix. The Swiss:P37256 protein, appears to be (i) a novel photosystem II subunit and (ii) required for maintaining optimal photosystem II activity under adverse growth conditions [1].
Domain
AB [auth 3X],
GA [auth 2X],
M [auth 1X],
UB [auth 4X]		PF06596Photosystem II reaction centre X protein (PsbX) (PsbX)Photosystem II reaction centre X protein (PsbX)- Family
CB [auth 3Z],
IA [auth 2Z],
O [auth 1Z],
WB [auth 4Z]		PF01737YCF9 (Ycf9)YCF9- Family
DB [auth 32],
JA [auth 22],
P [auth 12],
XB [auth 42]		PF00421Photosystem II protein (PSII)Photosystem II protein- Family
AC [auth 43],
GB [auth 33],
MA [auth 23],
S [auth 13]		PF00421Photosystem II protein (PSII)Photosystem II protein- Family
BC [auth 44],
HB [auth 34],
NA [auth 24],
T [auth 14]		PF00421Photosystem II protein (PSII)Photosystem II protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1A],
IB [auth 4A],
OA [auth 3A],
U [auth 2A]		Photosystem II protein D1 2
B [auth 1B],
JB [auth 4B],
PA [auth 3B],
V [auth 2B]		Photosystem II CP47 reaction center protein
C [auth 1C],
KB [auth 4C],
QA [auth 3C],
W [auth 2C]		Photosystem II CP43 reaction center protein
D [auth 1D],
LB [auth 4D],
RA [auth 3D],
X [auth 2D]		Photosystem II D2 protein 1
E [auth 1E],
MB [auth 4E],
SA [auth 3E],
Y [auth 2E]		Cytochrome b559 subunit alpha
F [auth 1F],
NB [auth 4F],
TA [auth 3F],
Z [auth 2F]		Photosystem II protein Y
AA [auth 2H],
G [auth 1H],
OB [auth 4H],
UA [auth 3H]		Photosystem II 10 kDa phosphoprotein PsbH
BA [auth 2I],
H [auth 1I],
PB [auth 4I],
VA [auth 3I]		Photosystem II protein PsbI-
CA [auth 2K],
I [auth 1K],
QB [auth 4K],
WA [auth 3K]		Photosystem II reaction center protein K-
DA [auth 2L],
J [auth 1L],
RB [auth 4L],
XA [auth 3L]		Photosystem II reaction center protein L-
EA [auth 2M],
K [auth 1M],
SB [auth 4M],
YA [auth 3M]		Photosystem II reaction center protein M-
FA [auth 2T],
L [auth 1T],
TB [auth 4T],
ZA [auth 3T]		Photosystem II reaction center protein T-
AB [auth 3X],
GA [auth 2X],
M [auth 1X],
UB [auth 4X]		Photosystem II reaction center X protein-
BB [auth 3Y],
HA [auth 2Y],
N [auth 1Y],
VB [auth 4Y]		Photosystem II reaction center protein Ycf12---
CB [auth 3Z],
IA [auth 2Z],
O [auth 1Z],
WB [auth 4Z]		Photosystem II reaction center protein Z-
DB [auth 32],
JA [auth 22],
P [auth 12],
XB [auth 42]		High light inducible protein
EB [auth 3G],
KA [auth 2G],
Q [auth 1G],
YB [auth 4G]		Unknown protein---
FB [auth 31],
LA [auth 21],
R [auth 11],
ZB [auth 41]		High light inducible protein
AC [auth 43],
GB [auth 33],
MA [auth 23],
S [auth 13]		High light inducible protein
BC [auth 44],
HB [auth 34],
NA [auth 24],
T [auth 14]		High light inducible protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 1A],
IB [auth 4A],
OA [auth 3A],
U [auth 2A]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A [auth 1A],
IB [auth 4A],
OA [auth 3A],
U [auth 2A]		IPR005867Photosystem II protein D1Family
A [auth 1A],
IB [auth 4A],
OA [auth 3A],
U [auth 2A]		IPR000484Photosynthetic reaction centre, L/MFamily
A [auth 1A],
IB [auth 4A],
OA [auth 3A],
U [auth 2A]		IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
A [auth 1A],
IB [auth 4A],
OA [auth 3A],
U [auth 2A]		IPR055266Photosystem II protein D1/D2Family
B [auth 1B],
JB [auth 4B],
PA [auth 3B],
V [auth 2B]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
B [auth 1B],
JB [auth 4B],
PA [auth 3B],
V [auth 2B]		IPR000932Photosystem antenna protein-likeFamily
B [auth 1B],
JB [auth 4B],
PA [auth 3B],
V [auth 2B]		IPR017486Photosystem II CP47 reaction centre proteinFamily
C [auth 1C],
KB [auth 4C],
QA [auth 3C],
W [auth 2C]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
C [auth 1C],
KB [auth 4C],
QA [auth 3C],
W [auth 2C]		IPR000932Photosystem antenna protein-likeFamily
C [auth 1C],
KB [auth 4C],
QA [auth 3C],
W [auth 2C]		IPR005869Photosystem II CP43 reaction centre proteinFamily
C [auth 1C],
KB [auth 4C],
QA [auth 3C],
W [auth 2C]		IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
D [auth 1D],
LB [auth 4D],
RA [auth 3D],
X [auth 2D]		IPR005868Photosystem II D2Family
D [auth 1D],
LB [auth 4D],
RA [auth 3D],
X [auth 2D]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
D [auth 1D],
LB [auth 4D],
RA [auth 3D],
X [auth 2D]		IPR000484Photosynthetic reaction centre, L/MFamily
D [auth 1D],
LB [auth 4D],
RA [auth 3D],
X [auth 2D]		IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
D [auth 1D],
LB [auth 4D],
RA [auth 3D],
X [auth 2D]		IPR055266Photosystem II protein D1/D2Family
E [auth 1E],
MB [auth 4E],
SA [auth 3E],
Y [auth 2E]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
E [auth 1E],
MB [auth 4E],
SA [auth 3E],
Y [auth 2E]		IPR006217Photosystem II cytochrome b559, alpha subunitFamily
E [auth 1E],
MB [auth 4E],
SA [auth 3E],
Y [auth 2E]		IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
E [auth 1E],
MB [auth 4E],
SA [auth 3E],
Y [auth 2E]		IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
E [auth 1E],
MB [auth 4E],
SA [auth 3E],
Y [auth 2E]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
F [auth 1F],
NB [auth 4F],
TA [auth 3F],
Z [auth 2F]		IPR006241Photosystem II cytochrome b559, beta subunitFamily
F [auth 1F],
NB [auth 4F],
TA [auth 3F],
Z [auth 2F]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
F [auth 1F],
NB [auth 4F],
TA [auth 3F],
Z [auth 2F]		IPR009388Photosystem II PsbYFamily
F [auth 1F],
NB [auth 4F],
TA [auth 3F],
Z [auth 2F]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
AA [auth 2H],
G [auth 1H],
OB [auth 4H],
UA [auth 3H]		IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
AA [auth 2H],
G [auth 1H],
OB [auth 4H],
UA [auth 3H]		IPR001056Photosystem II reaction centre protein HFamily
BA [auth 2I],
H [auth 1I],
PB [auth 4I],
VA [auth 3I]		IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
BA [auth 2I],
H [auth 1I],
PB [auth 4I],
VA [auth 3I]		IPR003686Photosystem II PsbIFamily
CA [auth 2K],
I [auth 1K],
QB [auth 4K],
WA [auth 3K]		IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
CA [auth 2K],
I [auth 1K],
QB [auth 4K],
WA [auth 3K]		IPR003687Photosystem II PsbKFamily
DA [auth 2L],
J [auth 1L],
RB [auth 4L],
XA [auth 3L]		IPR003372Photosystem II PsbLFamily
DA [auth 2L],
J [auth 1L],
RB [auth 4L],
XA [auth 3L]		IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
EA [auth 2M],
K [auth 1M],
SB [auth 4M],
YA [auth 3M]		IPR007826Photosystem II PsbMFamily
EA [auth 2M],
K [auth 1M],
SB [auth 4M],
YA [auth 3M]		IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
FA [auth 2T],
L [auth 1T],
TB [auth 4T],
ZA [auth 3T]		IPR001743Photosystem II PsbTFamily
FA [auth 2T],
L [auth 1T],
TB [auth 4T],
ZA [auth 3T]		IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
AB [auth 3X],
GA [auth 2X],
M [auth 1X],
UB [auth 4X]		IPR009518Photosystem II PsbXFamily
AB [auth 3X],
GA [auth 2X],
M [auth 1X],
UB [auth 4X]		IPR023431Photosystem II PsbX, type 1 subfamilyFamily
CB [auth 3Z],
IA [auth 2Z],
O [auth 1Z],
WB [auth 4Z]		IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
CB [auth 3Z],
IA [auth 2Z],
O [auth 1Z],
WB [auth 4Z]		IPR002644Photosystem II PsbZ, reaction centreFamily
DB [auth 32],
JA [auth 22],
P [auth 12],
XB [auth 42]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
DB [auth 32],
JA [auth 22],
P [auth 12],
XB [auth 42]		IPR000932Photosystem antenna protein-likeFamily
FB [auth 31],
LA [auth 21],
R [auth 11],
ZB [auth 41]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
FB [auth 31],
LA [auth 21],
R [auth 11],
ZB [auth 41]		IPR000932Photosystem antenna protein-likeFamily
AC [auth 43],
GB [auth 33],
MA [auth 23],
S [auth 13]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
AC [auth 43],
GB [auth 33],
MA [auth 23],
S [auth 13]		IPR000932Photosystem antenna protein-likeFamily
BC [auth 44],
HB [auth 34],
NA [auth 24],
T [auth 14]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
BC [auth 44],
HB [auth 34],
NA [auth 24],
T [auth 14]		IPR000932Photosystem antenna protein-likeFamily