7Y8W | pdb_00007y8w

Crystal structure of DLC-1/SAO-1 complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
R	TRAPP	e7y8wR1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
Q	TRAPP	e7y8wQ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
N	Sulfotransfer_4	e7y8wN1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Sulfotransfer_4	ECOD (v294.1)
M	TRAPP	e7y8wM1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
J	TRAPP	e7y8wJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
I	TRAPP	e7y8wI1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
H	TRAPP	e7y8wH1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
G	TRAPP	e7y8wG1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
D	TRAPP	e7y8wD1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
C	TRAPP	e7y8wC1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
B	TRAPP	e7y8wB1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)
A	TRAPP	e7y8wA1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: TRAPP	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, G A, B, C, D, G, H, I, J, M, N, Q, R	PF01221	Dynein light chain type 1 (Dynein_light)	Dynein light chain type 1		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, F, K, L, O E, F, K, L, O, P, S, T	Isoform b of Suppressor of aph-1	WD40-repeat domain binding protein binding binding protein domain specific binding	regulation of biological process regulation of cellular process regulation of protein modification process regulation of post-translational protein modification regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process regulation of primary metabolic process protein deneddylation regulation of protein deneddylation protein modification by small protein removal macromolecule modification metabolic process regulation of biological process regulation of cellular process regulation of protein modification process regulation of post-translational protein modification regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process regulation of primary metabolic process protein deneddylation regulation of protein deneddylation protein modification by small protein removal macromolecule modification metabolic process cellular process protein metabolic process macromolecule metabolic process regulation of protein modification by small protein conjugation or removal protein modification process post-translational protein modification regulation of metabolic process protein modification by small protein conjugation or removal cellular response to stimulus cell surface receptor signaling pathway response to stimulus signaling cell communication Notch signaling pathway signal transduction negative regulation of signaling negative regulation of biological process regulation of signal transduction negative regulation of cell communication negative regulation of cellular process regulation of signaling negative regulation of response to stimulus negative regulation of signal transduction negative regulation of Notch signaling pathway regulation of response to stimulus regulation of Notch signaling pathway regulation of cell communication	cell periphery cell cortex cellular anatomical structure intracellular anatomical structure cytoplasm cell division site cleavage furrow membrane plasma membrane plasma membrane region
A, B, C, D, G A, B, C, D, G, H, I, J, M, N, Q, R	Dynein light chain 1, cytoplasmic	protein binding binding dynein intermediate chain binding	cellular process apoptotic process cell death programmed cell death sexual reproduction reproductive process meiotic cell cycle cell cycle establishment of organelle localization cellular localization organelle transport along microtubule transport nucleus localization intracellular transport cellular process apoptotic process cell death programmed cell death sexual reproduction reproductive process meiotic cell cycle cell cycle establishment of organelle localization cellular localization organelle transport along microtubule transport nucleus localization intracellular transport establishment of localization localization organelle localization establishment of localization in cell nuclear migration along microtubule microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process nuclear migration cell division	intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex intracellular membraneless organelle microtubule cytoskeleton membrane-bounded organelle organelle envelope nuclear envelope nucleus intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex intracellular membraneless organelle microtubule cytoskeleton membrane-bounded organelle organelle envelope nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system cytoplasmic dynein complex catalytic complex dynein complex polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E, F, K, L, O E, F, K, L, O, P, S, T	IPR003169	GYF domain	Domain
E, F, K, L, O E, F, K, L, O, P, S, T	IPR035445	GYF-like domain superfamily	Homologous Superfamily
A, B, C, D, G A, B, C, D, G, H, I, J, M, N, Q, R	IPR037177	Dynein light chain superfamily	Homologous Superfamily
A, B, C, D, G A, B, C, D, G, H, I, J, M, N, Q, R	IPR001372	Dynein light chain, type 1/2	Family
A, B, C, D, G A, B, C, D, G, H, I, J, M, N, Q, R	IPR019763	Dynein light chain, type 1/2, conserved site	Conserved Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.