7XBR | pdb_00007xbr

Crystal structure of phosphorylated AtMKK5

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	PAS_11	e7xbrH1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: PAS_11	ECOD (v294.1)
F	PAS_11	e7xbrF1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: PAS_11	ECOD (v294.1)
G	PAS_11	e7xbrG1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: PAS_11	ECOD (v294.1)
E	PAS_11	e7xbrE1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: PAS_11	ECOD (v294.1)
D	PAS_11	e7xbrD1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: PAS_11	ECOD (v294.1)
C	PAS_11	e7xbrC1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: PAS_11	ECOD (v294.1)
B	PAS_11	e7xbrB1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: PAS_11	ECOD (v294.1)
A	PAS_11	e7xbrA1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: PAS_11	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F, H	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain
A, B, C, D, E A, B, C, D, E, G	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F, H	Mitogen-activated protein kinase kinase 5	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein serine/threonine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups MAP kinase kinase activity protein serine/threonine/tyrosine kinase activity protein serine kinase activity protein tyrosine kinase activity	regulation of cellular process ethylene metabolic process positive regulation of biological process hydrocarbon metabolic process positive regulation of metabolic process positive regulation of biosynthetic process alkene biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process olefinic compound biosynthetic process biological regulation regulation of olefin biosynthetic process positive regulation of ethylene biosynthetic process regulation of cellular process ethylene metabolic process positive regulation of biological process hydrocarbon metabolic process positive regulation of metabolic process positive regulation of biosynthetic process alkene biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process olefinic compound biosynthetic process biological regulation regulation of olefin biosynthetic process positive regulation of ethylene biosynthetic process regulation of ethylene biosynthetic process positive regulation of olefin biosynthetic process olefin biosynthetic process biosynthetic process ethylene biosynthetic process cellular process metabolic process olefinic compound metabolic process olefin metabolic process hydrocarbon biosynthetic process regulation of metabolic process cell division cellular response to stimulus biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response immune response defense response to symbiont response to external stimulus cell death response to biotic stimulus symbiont-induced defense-related programmed cell death cellular response to stress defense response to other organism response to stress immune system process plant-type hypersensitive response innate immune response response to external biotic stimulus programmed cell death regulation of stomatal movement stomatal closure stomatal movement regulation of stomatal closure developmental process multicellular organismal process reproductive system development reproductive process developmental process involved in reproduction reproductive shoot system development multicellular organism development anatomical structure development reproductive structure development shoot system development post-embryonic development inflorescence development system development response to lipid abscisic acid-activated signaling pathway signaling hormone-mediated signaling pathway cell communication cellular response to endogenous stimulus response to hormone signal transduction cellular response to hormone stimulus cellular response to abscisic acid stimulus response to abscisic acid response to alcohol response to endogenous stimulus response to oxygen-containing compound cellular response to oxygen-containing compound cellular response to chemical stimulus cellular response to alcohol response to chemical cellular response to lipid regulation of growth regulation of cellular component organization regulation of developmental process developmental growth unidimensional cell growth cell morphogenesis cell growth regulation of cell morphogenesis cellular component organization cellular component organization or biogenesis regulation of anatomical structure morphogenesis regulation of developmental growth growth regulation of cell growth developmental growth involved in morphogenesis regulation of unidimensional cell growth anatomical structure morphogenesis root meristem growth meristem maintenance meristem growth root development plant organ development root morphogenesis tissue development regulation of root meristem growth regulation of meristem growth plant organ morphogenesis meristem development root system development abscission flower development floral organ abscission floral organ development	intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule
A, B, C, D, E A, B, C, D, E, G	Mitogen-activated protein kinase kinase 5	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein serine/threonine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups MAP kinase kinase activity protein serine/threonine/tyrosine kinase activity protein serine kinase activity protein tyrosine kinase activity	regulation of cellular process ethylene metabolic process positive regulation of biological process hydrocarbon metabolic process positive regulation of metabolic process positive regulation of biosynthetic process alkene biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process olefinic compound biosynthetic process biological regulation regulation of olefin biosynthetic process positive regulation of ethylene biosynthetic process regulation of cellular process ethylene metabolic process positive regulation of biological process hydrocarbon metabolic process positive regulation of metabolic process positive regulation of biosynthetic process alkene biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process olefinic compound biosynthetic process biological regulation regulation of olefin biosynthetic process positive regulation of ethylene biosynthetic process regulation of ethylene biosynthetic process positive regulation of olefin biosynthetic process olefin biosynthetic process biosynthetic process ethylene biosynthetic process cellular process metabolic process olefinic compound metabolic process olefin metabolic process hydrocarbon biosynthetic process regulation of metabolic process cell division cellular response to stimulus biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response immune response defense response to symbiont response to external stimulus cell death response to biotic stimulus symbiont-induced defense-related programmed cell death cellular response to stress defense response to other organism response to stress immune system process plant-type hypersensitive response innate immune response response to external biotic stimulus programmed cell death regulation of stomatal movement stomatal closure stomatal movement regulation of stomatal closure developmental process multicellular organismal process reproductive system development reproductive process developmental process involved in reproduction reproductive shoot system development multicellular organism development anatomical structure development reproductive structure development shoot system development post-embryonic development inflorescence development system development response to lipid abscisic acid-activated signaling pathway signaling hormone-mediated signaling pathway cell communication cellular response to endogenous stimulus response to hormone signal transduction cellular response to hormone stimulus cellular response to abscisic acid stimulus response to abscisic acid response to alcohol response to endogenous stimulus response to oxygen-containing compound cellular response to oxygen-containing compound cellular response to chemical stimulus cellular response to alcohol response to chemical cellular response to lipid regulation of growth regulation of cellular component organization regulation of developmental process developmental growth unidimensional cell growth cell morphogenesis cell growth regulation of cell morphogenesis cellular component organization cellular component organization or biogenesis regulation of anatomical structure morphogenesis regulation of developmental growth growth regulation of cell growth developmental growth involved in morphogenesis regulation of unidimensional cell growth anatomical structure morphogenesis root meristem growth meristem maintenance meristem growth root development plant organ development root morphogenesis tissue development regulation of root meristem growth regulation of meristem growth plant organ morphogenesis meristem development root system development abscission flower development floral organ abscission floral organ development	intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F, H	IPR017441	Protein kinase, ATP binding site	Binding Site
F, H	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
F, H	IPR000719	Protein kinase domain	Domain
F, H	IPR053235	Ser/Thr Protein Kinase	Family
F, H	IPR008271	Serine/threonine-protein kinase, active site	Active Site
A, B, C, D, E A, B, C, D, E, G	IPR017441	Protein kinase, ATP binding site	Binding Site
A, B, C, D, E A, B, C, D, E, G	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, G	IPR000719	Protein kinase domain	Domain
A, B, C, D, E A, B, C, D, E, G	IPR053235	Ser/Thr Protein Kinase	Family
A, B, C, D, E A, B, C, D, E, G	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
F, H	SEP	Parent Component: SER RESID: AA0037 PSI-MOD : O-phospho-L-serine MOD:00046
F, H	TPO	Parent Component: THR RESID: AA0037 , AA0038 PSI-MOD : O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047
A, B, C, D, E A, B, C, D, E, G	SEP	Parent Component: SER RESID: AA0037 , AA0038 , AA0037 PSI-MOD : O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , O-phospho-L-serine MOD:00046
A, B, C, D, E A, B, C, D, E, G	TPO	Parent Component: THR RESID: AA0037 , AA0038 , AA0037 , AA0038 PSI-MOD : O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.