7WR1 | pdb_00007wr1

P32 of caspase-4 C258A mutant in complex with OspC3 C-terminal ankyrin-repeat domain

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Caspase-like	8098714	3001096	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Caspase-like	8098714	3001096	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	V-set	e7wr1D1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: V-set	ECOD (v294.1)
C	V-set	e7wr1C1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: V-set	ECOD (v294.1)
B	Peptidase_C14	e7wr1B1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: Peptidase_C14	ECOD (v294.1)
A	Peptidase_C14	e7wr1A1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: Peptidase_C14	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.1460	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)
A	3.40.50.1460	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00656	Caspase domain (Peptidase_C14)	Caspase domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D	OspC3	protein binding binding calmodulin binding ADP-riboxanase activity catalytic activity, acting on a protein transferase activity lyase activity ammonia-lyase activity catalytic activity transferase activity, transferring phosphorus-containing groups carbon-nitrogen lyase activity toxin activity	symbiont-mediated suppression of host signal transduction pathway symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated suppression of host calcium-mediated signal transduction symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host programmed cell death symbiont-mediated suppression of host programmed cell death	cellular anatomical structure extracellular region host cellular component host intracellular part host cell cytoplasm host cell part host intracellular region other organism part
A, B	Caspase-4	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity binding lipid binding lipopolysaccharide binding carbohydrate derivative binding CARD domain binding protein binding protein domain specific binding	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process response to cytokine regulation of signal transduction positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway cell communication positive regulation of tumor necrosis factor-mediated signaling pathway positive regulation of response to stimulus cellular response to tumor necrosis factor cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process response to cytokine regulation of signal transduction positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway cell communication positive regulation of tumor necrosis factor-mediated signaling pathway positive regulation of response to stimulus cellular response to tumor necrosis factor tumor necrosis factor-mediated signaling pathway cellular response to cytokine stimulus signal transduction positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway regulation of tumor necrosis factor-mediated signaling pathway regulation of cytokine-mediated signaling pathway biological regulation response to peptide regulation of response to cytokine stimulus regulation of response to stimulus response to chemical regulation of cell communication cellular process response to tumor necrosis factor positive regulation of cytokine-mediated signaling pathway positive regulation of signaling primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein autoprocessing biosynthetic process proteolysis protein processing metabolic process protein metabolic process macromolecule metabolic process response to interleukin-18 cellular response to interleukin-18 interleukin-18-mediated signaling pathway regulation of interleukin-18-mediated signaling pathway positive regulation of interleukin-18-mediated signaling pathway regulation of defense response regulation of response to external stimulus defense response response to external stimulus regulation of inflammatory response positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stress response to stress positive regulation of defense response inflammatory response cell death intracellular signal transduction apoptotic signaling pathway apoptotic process intrinsic apoptotic signaling pathway programmed cell death biological process involved in interspecies interaction between organisms immune response response to other organism defense response to symbiont response to biotic stimulus immune system process defense response to other organism innate immune response response to external biotic stimulus neuron apoptotic process positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death positive regulation of apoptotic process positive regulation of neuron apoptotic process regulation of neuron apoptotic process defense response to bacterium response to bacterium cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular component organization or biogenesis non-canonical inflammasome complex assembly intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress cellular response to stress response to endoplasmic reticulum stress pyroptotic inflammatory response cellular response to nitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to amyloid-beta cellular response to oxygen-containing compound cellular response to chemical stimulus response to amyloid-beta defense response to Gram-positive bacterium	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol cell periphery plasma membrane membrane protein-containing complex organelle subcompartment membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol cell periphery plasma membrane membrane protein-containing complex organelle subcompartment endomembrane system endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum organelle membrane endoplasmic reticulum membrane non-canonical inflammasome complex extracellular region canonical inflammasome complex NLRP1 inflammasome complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D	IPR010366	Arginine ADP-riboxanase OspC1-4	Family
A, B	IPR001309	Peptidase C14, p20 domain	Domain
A, B	IPR011600	Peptidase C14, caspase domain	Domain
A, B	IPR016129	Peptidase family C14A, His active site	Active Site
A, B	IPR015917	Peptidase C14A, caspase catalytic domain	Domain
A, B	IPR011029	Death-like domain superfamily	Homologous Superfamily
A, B	IPR029030	Caspase-like domain superfamily	Homologous Superfamily
A, B	IPR033139	Peptidase family C14A, cysteine active site	Active Site
A, B	IPR002138	Peptidase C14, caspase non-catalytic subunit p10	Domain
A, B	IPR001315	CARD domain	Domain
A, B	IPR002398	Peptidase C14 family	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: P49662	Liver Cirrhosis, Experimental schizophrenia cystic fibrosis malignant mesothelioma ovarian cancer plasma cell myeloma subependymal giant cell astrocytoma glioblastoma lung cancer non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis ulcerative colitis hepatocellular carcinoma lung carcinoma Liver Cirrhosis, Experimental schizophrenia cystic fibrosis malignant mesothelioma ovarian cancer plasma cell myeloma subependymal giant cell astrocytoma glioblastoma lung cancer non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis ulcerative colitis hepatocellular carcinoma lung carcinoma osteosarcoma pituitary cancer

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.