Annotations: 7WB4

Cryo-EM structure of the NR subunit from X. laevis NPC

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth b]	SCOP2B Superfamily	Coat and nuclear envelope proteins	8105019	3002276	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Coat and nuclear envelope proteins	8105019	3002276	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
O [auth g]	AAA_6	e7wb4g1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_6	ECOD (v295.2)
M [auth G]	AAA_6	e7wb4G1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_6	ECOD (v295.2)
N [auth h]	4PPT_N	e7wb4h1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: 4PPT_N	ECOD (v295.2)
L [auth H]	PhnJ	e7wb4H1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)
K	4PPT_N	e7wb4K1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: 4PPT_N	ECOD (v295.2)
I [auth e]	AAA_6	e7wb4e1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_6	ECOD (v295.2)
H [auth E]	AAA_6	e7wb4E1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_6	ECOD (v295.2)
T [auth D]	PhnJ	e7wb4D1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)
E [auth d]	4PPT_N	e7wb4d1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: 4PPT_N	ECOD (v295.2)
J [auth f]	4PPT_N	e7wb4f1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: 4PPT_N	ECOD (v295.2)
D [auth F]	PhnJ	e7wb4F1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)
G [auth c]	4PPT_N	e7wb4c1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: 4PPT_N	ECOD (v295.2)
C	PhnJ	e7wb4C1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)
F [auth b]	4PPT_N	e7wb4b1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: 4PPT_N	ECOD (v295.2)
B	PhnJ	e7wb4B1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)
U [auth O]	AAA_6	e7wb4O1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_6	ECOD (v295.2)
R [auth L]	4PPT_N	e7wb4L1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: 4PPT_N	ECOD (v295.2)
V [auth M]	AAA_6	e7wb4M1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_6	ECOD (v295.2)
Q [auth i]	AAA_6	e7wb4i1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_6	ECOD (v295.2)
P [auth I]	AAA_6	e7wb4I1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_6	ECOD (v295.2)
Y [auth P]	PhnJ	e7wb4P1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)
X [auth j]	PhnJ	e7wb4j1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)
W [auth p]	PhnJ	e7wb4p1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)
A [auth J]	4PPT_N	e7wb4J1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: 4PPT_N	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
M [auth G], O [auth g]	PF12110	Nuclear protein 96 (Nup96)	Nuclear protein 96	Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the n ...	Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the nuclear pore complex between the inner and outer nuclear membranes. Nup96 is predicted to be an alpha helical solenoid. The interaction between Nup96 and Sec13 is the point of curvature in the heptameric complex. [1] [2]	Domain
L [auth H], N [auth h]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
H [auth E], I [auth e]	PF23347	Nup160 C-terminal TPR (TPR_Nup160_C)	Nup160 C-terminal TPR	-	Repeat
H [auth E], I [auth e]	PF23345	Nucleoporin NUP160, helical domain (NUP160_helical)	Nucleoporin NUP160, helical domain	This entry represents the central helical domain of NUP160, which is found in animals, including humans, mice, and Drosophila melanogaster. NUP160 is one of up to 60 proteins that constitute the Nuclear Pore Complex (NPC) as a component of the NUP107 ...	This entry represents the central helical domain of NUP160, which is found in animals, including humans, mice, and Drosophila melanogaster. NUP160 is one of up to 60 proteins that constitute the Nuclear Pore Complex (NPC) as a component of the NUP107-160 subcomplex [1]. NUP160, in conjunction with NUP133, interacts with NUP98 and NUP153, mediating mRNA export [1]. NUP160 mutations have been associated with Steroid-Resistant Nephrotic Syndrome (SRNS). Silencing Drosophila NUP160 specifically in nephrocytes results in functional abnormalities, reduced cell size and nuclear volume, as well as a disorganised nuclear membrane structure [2].	Domain
H [auth E], I [auth e]	PF23354	NUP160/120 middle TPR (TPR_NUP160_120_M)	NUP160/120 middle TPR	-	Repeat
H [auth E], I [auth e]	PF11715	Nucleoporin Nup120/160, beta-propeller domain (Beta-prop_Nup120_160)	Nucleoporin Nup120/160, beta-propeller domain	-	Repeat
E [auth d], T [auth D]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
D [auth F], J [auth f]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
C, G [auth c]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
B, F [auth b]	PF07575	Nup85 Nucleoporin (Nucleopor_Nup85)	Nup85 Nucleoporin	-	Repeat
AA [auth N], Z [auth n]	PF13934	Nuclear pore complex assembly (ELYS)	Nuclear pore complex assembly	-	Repeat
AA [auth N], Z [auth n]	PF16687	beta-propeller of ELYS nucleoporin (ELYS-bb)	beta-propeller of ELYS nucleoporin	-	Repeat
S [auth A]	PF11894	Nuclear pore complex scaffold, nucleoporins 186/192/205 (Nup192)	Nuclear pore complex scaffold, nucleoporins 186/192/205	-	Repeat
R [auth L], U [auth O]	PF04097	Nup93/Nic96 (Nic96)	Nup93/Nic96	-	Repeat
P [auth I], Q [auth i], V [auth M]	PF04121	Nuclear pore protein 84 / 107 (Nup84_Nup100)	Nuclear pore protein 84 / 107	-	Repeat
A [auth J], W [auth p], X [auth j], Y [auth P]	PF03177	Non-repetitive/WGA-negative nucleoporin C-terminal (Nucleoporin_C)	Non-repetitive/WGA-negative nucleoporin C-terminal	-	Repeat
A [auth J], W [auth p], X [auth j], Y [auth P]	PF08801	Nup133 N terminal like (Nucleoporin_N)	Nup133 N terminal like	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
M [auth G], O [auth g]	Nuclear pore complex protein Nup96	RNA binding binding nucleic acid binding structural molecule activity structural constituent of nuclear pore	localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport RNA export from nucleus establishment of RNA localization RNA localization nuclear export nucleobase-containing compound transport	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane membrane-enclosed lumen membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-containing complex nuclear protein-containing complex nuclear pore cytoplasmic filaments nuclear pore
L [auth H], N [auth h]	GATOR complex protein SEC13	structural molecule activity	membrane organization vesicle budding from membrane cellular localization transport intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization vesicle organization localization organelle organization establishment of localization in cell cellular process membrane organization vesicle budding from membrane cellular localization transport intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization vesicle organization localization organelle organization establishment of localization in cell cellular process cellular component organization or biogenesis COPII-coated vesicle budding Golgi vesicle transport cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling establishment of protein localization nucleocytoplasmic transport nuclear transport protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane cytoplasm organelle membrane lysosome cytosol vesicle coat intracellular vesicle transport vesicle membrane membrane protein complex membrane coat vesicle membrane cytoplasmic vesicle ER to Golgi transport vesicle membrane coated vesicle vesicle transport vesicle coated membrane COPII vesicle coat cytoplasmic vesicle membrane coated vesicle membrane COPII-coated ER to Golgi transport vesicle
K	Nup155-prov protein	structural molecule activity structural constituent of nuclear pore	cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery cellular localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope localization protein localization to organelle macromolecule localization cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery cellular localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope localization protein localization to organelle macromolecule localization intracellular protein localization protein localization to nuclear inner membrane establishment of protein localization nucleocytoplasmic transport transport nuclear transport intracellular transport establishment of localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell protein import into nucleus intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport RNA export from nucleus establishment of RNA localization RNA localization nuclear export nucleobase-containing compound transport	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane nuclear pore inner ring membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane nuclear pore inner ring protein-containing complex nuclear protein-containing complex nuclear pore
H [auth E], I [auth e]	outer Nup160	structural molecule activity structural constituent of nuclear pore	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
E [auth d], T [auth D]	Nucleoporin SEH1-B	structural molecule activity	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication TORC1 signaling positive regulation of signaling mitotic metaphase chromosome alignment mitotic cell cycle metaphase chromosome alignment localization chromosome localization organelle localization mitotic sister chromatid segregation cell cycle chromosome segregation cell cycle process mitotic nuclear division attachment of spindle microtubules to kinetochore organelle fission attachment of mitotic spindle microtubules to kinetochore chromosome organization sister chromatid segregation nuclear division mitotic cell cycle process nuclear chromosome segregation cellular response to nutrient levels response to nutrient levels cellular response to amino acid starvation cellular response to starvation cellular response to stress response to stress response to amino acid starvation response to starvation	protein-containing complex Seh1-associated complex membrane-bounded organelle intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope protein-containing complex Seh1-associated complex membrane-bounded organelle intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane cytoplasm organelle membrane lysosome GATOR2 complex
D [auth F], J [auth f]	MGC83926 protein	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore
C, G [auth c]	MGC154553 protein	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore
B, F [auth b]	Nuclear pore complex protein Nup85	structural molecule activity structural constituent of nuclear pore	developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development nephron development animal gross anatomical part developmental process kidney development renal system development system development establishment of protein localization cellular localization nucleocytoplasmic transport transport developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development nephron development animal gross anatomical part developmental process kidney development renal system development system development establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus cellular process intracellular protein localization intracellular protein transport nitrogen compound transport mRNA transport mRNA export from nucleus RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process regulation of cellular process positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore nuclear membrane membrane organelle membrane
AA [auth N], Z [auth n]	Protein ELYS	-	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
S [auth A]	MGC83295 protein	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis	nuclear pore inner ring membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
R [auth L], U [auth O]	Nuclear pore complex protein Nup93	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process nuclear pore organization protein-containing complex organization pore complex assembly cellular component organization cellular component biogenesis nuclear pore complex assembly nucleus organization organelle organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen protein-containing complex nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope nuclear pore nuclear membrane membrane organelle membrane
P [auth I], Q [auth i], V [auth M]	Nuclear pore complex protein	structural molecule activity structural constituent of nuclear pore	cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport nitrogen compound transport mRNA transport mRNA export from nucleus RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore nuclear membrane membrane organelle membrane
A [auth J], W [auth p], X [auth j], Y [auth P]	outer Nup133	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process developmental process animal organ development anatomical structure development animal gross anatomical part developmental process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport cellular component organization organelle organization chromosome organization cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery multicellular organism development multicellular organismal process system development	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
M [auth G], O [auth g]	IPR025574	Nucleoporin FG repeat	Repeat
M [auth G], O [auth g]	IPR037665	Nucleoporin peptidase S59-like	Family
M [auth G], O [auth g]	IPR036903	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily	Homologous Superfamily
M [auth G], O [auth g]	IPR007230	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain	Domain
M [auth G], O [auth g]	IPR021967	Nuclear pore complex protein NUP96, C-terminal domain	Domain
L [auth H], N [auth h]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
L [auth H], N [auth h]	IPR037363	Sec13/Seh1 family	Family
L [auth H], N [auth h]	IPR001680	WD40 repeat	Repeat
L [auth H], N [auth h]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
K	IPR042537	Nucleoporin, Nup155-like, C-terminal, subdomain 2	Homologous Superfamily
K	IPR042533	Nucleoporin, Nup155-like, C-terminal, subdomain 1	Homologous Superfamily
K	IPR042538	Nucleoporin, Nup155-like, C-terminal, subdomain 3	Homologous Superfamily
K	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
K	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
K	IPR004870	Nucleoporin, Nup155-like	Family
K	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain
H [auth E], I [auth e]	IPR056535	NUP160, middle TPR domain	Domain
H [auth E], I [auth e]	IPR059141	Nucleoporin Nup120/160, beta-propeller domain	Domain
H [auth E], I [auth e]	IPR021717	Nucleoporin Nup120/160	Family
H [auth E], I [auth e]	IPR056536	NUP160, C-terminal TPR domain	Domain
H [auth E], I [auth e]	IPR056547	NUP160, helical domain	Domain
E [auth d], T [auth D]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
E [auth d], T [auth D]	IPR037363	Sec13/Seh1 family	Family
E [auth d], T [auth D]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
E [auth d], T [auth D]	IPR001680	WD40 repeat	Repeat
E [auth d], T [auth D]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
D [auth F], J [auth f]	IPR037626	Nucleoporin Nup37	Family
D [auth F], J [auth f]	IPR001680	WD40 repeat	Repeat
D [auth F], J [auth f]	IPR019775	WD40 repeat, conserved site	Conserved Site
D [auth F], J [auth f]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
D [auth F], J [auth f]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
C, G [auth c]	IPR001680	WD40 repeat	Repeat
C, G [auth c]	IPR019775	WD40 repeat, conserved site	Conserved Site
C, G [auth c]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
C, G [auth c]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
B, F [auth b]	IPR011502	Nucleoporin Nup85-like	Family
AA [auth N], Z [auth n]	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	Homologous Superfamily
AA [auth N], Z [auth n]	IPR032040	ELYS, beta-propeller domain	Domain
AA [auth N], Z [auth n]	IPR052620	ELYS/MEL-28 Nuclear Assembly Factor	Family
AA [auth N], Z [auth n]	IPR025151	ELYS-like domain	Domain
S [auth A]	IPR021827	Nucleoporin Nup186/Nup192/Nup205	Family
R [auth L], U [auth O]	IPR007231	Nucleoporin interacting component Nup93/Nic96	Family
P [auth I], Q [auth i], V [auth M]	IPR007252	Nuclear pore protein 84/107	Family
A [auth J], W [auth p], X [auth j], Y [auth P]	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
A [auth J], W [auth p], X [auth j], Y [auth P]	IPR037624	Nuclear pore complex protein Nup133-like	Family
A [auth J], W [auth p], X [auth j], Y [auth P]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A [auth J], W [auth p], X [auth j], Y [auth P]	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain