Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
U [auth W]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
CA [auth e]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
I [auth K]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
M [auth O]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
Q [auth S]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
Y [auth a]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
N [auth P]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
R [auth T]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
DA [auth f]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
J [auth L]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
V [auth X]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
Z [auth b]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
K [auth M]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
O [auth Q]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
S [auth U]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
W [auth Y]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
AA [auth c]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
EA [auth g]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
X [auth Z]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
BA [auth d]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
FA [auth h]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
L [auth N]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
P [auth R]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
T [auth V]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EHistonee7v9kE1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
U [auth W]Histonee7v9kW1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
AHistonee7v9kA1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
CA [auth e]Histonee7v9ke1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
I [auth K]Histonee7v9kK1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
M [auth O]Histonee7v9kO1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
Q [auth S]Histonee7v9kS1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
Y [auth a]Histonee7v9ka1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
N [auth P]Histone_1e7v9kP1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
R [auth T]Histone_1e7v9kT1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
BHistone_1e7v9kB1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
DA [auth f]Histone_1e7v9kf1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
FHistone_1e7v9kF1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
J [auth L]Histone_1e7v9kL1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
V [auth X]Histone_1e7v9kX1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
Z [auth b]Histone_1e7v9kb1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
CHistone_1e7v9kC1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
K [auth M]Histone_1e7v9kM1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
O [auth Q]Histone_1e7v9kQ1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
S [auth U]Histone_1e7v9kU1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
W [auth Y]Histone_1e7v9kY1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
AA [auth c]Histone_1e7v9kc1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
EA [auth g]Histone_1e7v9kg1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
GHistone_1e7v9kG1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
DHistonee7v9kD1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
HHistonee7v9kH1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
X [auth Z]Histonee7v9kZ1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
BA [auth d]Histonee7v9kd1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
FA [auth h]Histonee7v9kh1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
L [auth N]Histonee7v9kN1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
P [auth R]Histonee7v9kR1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
T [auth V]Histonee7v9kV1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain
PF16211C-terminus of histone H2A (Histone_H2A_C)C-terminus of histone H2A- Family
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Histone H3.1
Histone H4
Histone H2A type 1-B/E
Histone H2B type 1-K
GA [auth I]DNA (539-mer)---
HA [auth J]DNA (539-mer)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR009072Histone-foldHomologous Superfamily
IPR007125Histone H2A/H2B/H3Domain
IPR000164Histone H3/CENP-AFamily
IPR009072Histone-foldHomologous Superfamily
IPR035425CENP-T/Histone H4, histone foldDomain
IPR001951Histone H4Family
IPR019809Histone H4, conserved siteConserved Site
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
IPR009072Histone-foldHomologous Superfamily
IPR007125Histone H2A/H2B/H3Domain
IPR002119Histone H2AFamily
IPR032454Histone H2A, C-terminal domainDomain
IPR032458Histone H2A conserved siteConserved Site
IPR009072Histone-foldHomologous Superfamily
IPR007125Histone H2A/H2B/H3Domain
IPR000558Histone H2BFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP68431
PharosP62805
PharosP04908
PharosO60814